RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 B3GALNT2Q8NCR0 500 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ZSCAN18Q8TBC5 510 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-204ENST00000375290 C2orf49Q9BVC5 232 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-204ENST00000375290 GRIP1Q9Y3R0 1128 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 AKAP12Q02952 1782 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 CHRNGP07510 517 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 SLC25A52Q3SY17 297 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ALG3Q92685 438 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 HSD17B14Q9BPX1 270 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 MARCH7Q9H992 704 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ANKRA2Q9H9E1 313 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 RAB23Q9ULC3 237 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 BCS1LQ9Y276 419 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 TELO2Q9Y4R8 837 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 FAM86B1E9PN63 330 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 FAM86B2P0C5J1 330 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 F8A1P23610 371 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 IGFBP5P24593 272 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 UGT1A5P35504 534 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 HALP42357 657 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 CUZD1Q86UP6 607 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 FAM131BQ86XD5 332 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 UBR7Q8N806 425 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ZDHHC18Q9NUE0 388 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 CCNT2O60583 730 aaKnown RBP10.2□□□□□ -0.78
PTCH1-204ENST00000375290 IGSF6O95976 241 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 SLC6A4P31645 630 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 PTPN9P43378 593 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 UNC5AQ6ZN44 842 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 RBFAQ8N0V3 343 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 NUDT4Q9NZJ9 180 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 CKLFQ9UBR5 152 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 CYB561D2O14569 222 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 GRIA1P42261 906 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 PTSQ03393 145 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 FAM131AQ6UXB0 335 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 RASSF6Q6ZTQ3 369 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 RASAL3Q86YV0 1011 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 C1QTNF7Q9BXJ2 289 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 AP1M2Q9Y6Q5 423 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 CENPBD1B2RD01 187 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 DHX15O43143 795 aaKnown RBP10.2□□□□□ -0.78
PTCH1-204ENST00000375290 SERPINA4P29622 427 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 GABARAPL2P60520 117 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 ZNF423Q2M1K9 1284 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 RIT1Q92963 219 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 S100A13Q99584 98 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 KLHL1Q9NR64 748 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 OR12D3Q9UGF7 316 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 F5H423 210 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-204ENST00000375290 PRKD3O94806 890 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 HPRP00739 348 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 HPGDP15428 266 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 RORCP51449 518 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 DCLRE1AQ6PJP8 1040 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 PDSS2Q86YH6 399 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-204ENST00000375290 SELENOMQ8WWX9 145 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 KCNH4Q9UQ05 1017 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 PRELID1Q9Y255 219 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 MYH3P11055 1940 aa10.2□□□□□ -0.78
PTCH1-204ENST00000375290 F8VP50 259 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 POLR2JP52435 117 aaKnown RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 NDST1P52848 882 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 HMGCS2P54868 508 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 EEFSECP57772 596 aaKnown RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 MON1BQ7L1V2 547 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PTAR1Q7Z6K3 402 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 SEPT12Q8IYM1 358 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 SRFBP1Q8NEF9 429 aaKnown RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 FBXO32Q969P5 355 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PDCD2LQ9BRP1 358 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 ROGDIQ9GZN7 287 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 MTIF3Q9H2K0 278 aaKnown RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 ARL8BQ9NVJ2 186 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 FAM86C2PA6NEL3 165 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PSMD10O75832 226 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 ZBTB11O95625 1053 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 GRIK2Q13002 908 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PRKD1Q15139 912 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 BNIPLQ7Z465 357 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 TMEM192Q8IY95 271 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 LBHD1Q9BQE6 289 aaPredicted RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 C1QTNF1Q9BXJ1 281 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 IL17RBQ9NRM6 502 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 BNIP3LO60238 219 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 LPCAT1Q8NF37 534 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 FNDC8Q8TC99 324 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 MRPL9Q9BYD2 267 aaKnown RBP10.19□□□□□ -0.78
PTCH1-204ENST00000375290 CPNE5Q9HCH3 593 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 VWA7Q9Y334 891 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 CHP2O43745 196 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 ZCCHC23Q6ZST2 131 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 DSG4Q86SJ6 1040 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 ACTR6Q9GZN1 396 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 XPR1Q9UBH6 696 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 PRKAG3Q9UGI9 489 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 SH3PXD2BA1X283 911 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 RFXANKO14593 260 aa10.19□□□□□ -0.78
PTCH1-204ENST00000375290 NDUFS2O75306 463 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms