RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PANX1Q96RD7 426 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 TUBGCP5Q96RT8 1024 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 AGAP2Q99490 1192 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CCNB1IP1Q9NPC3 277 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF358Q9NW07 568 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 TIMM22Q9Y584 194 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CCDC189A1A4V9 331 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CENPXA8MT69 81 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 G3V2T6 193 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 TAF4O00268 1085 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 RFXANKO14593 260 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ZBTB11O95625 1053 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 MAGEA10P43363 369 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 TAS2R39P59534 338 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF57Q68EA5 555 aaPredicted RBP11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF554Q86TJ5 538 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 MON1AQ86VX9 555 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 PLEKHO2Q8TD55 490 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 TWIST2Q8WVJ9 160 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 SEC14L1Q92503 715 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 CD101Q93033 1021 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 REPS1Q96D71 796 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 ADGRE2Q9UHX3 823 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 SNED1Q8TER0 1413 aa11.55□□□□□ -0.56
PTCH1-203ENST00000375274 SLC28A1O00337 649 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 TSPAN19P0C672 248 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 PTPN3P26045 913 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 NMBRP28336 390 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 CRYBB1P53674 252 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 SREBF2Q12772 1141 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 CNPY1Q3B7I2 92 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 SPATA19Q7Z5L4 167 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 HIPK1Q86Z02 1210 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 ZC3H3Q8IXZ2 948 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 PARP8Q8N3A8 854 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 CAPSLQ8WWF8 208 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 CENPNQ96H22 339 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 FAXDC2Q96IV6 333 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 FAM210AQ96ND0 272 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 ZCCHC2Q9C0B9 1178 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 OSGEPL1Q9H4B0 414 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 AGO3Q9H9G7 860 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 STARD7Q9NQZ5 370 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 PPM1HQ9ULR3 514 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 MYH2Q9UKX2 1941 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 CXorf49A8MYA2 514 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 C9JVG2 144 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 MT-CYBP00156 380 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 DARSP14868 501 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 C4BPBP20851 252 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 RPS9P46781 194 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 ATXN1P54253 815 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 SLC10A6Q3KNW5 377 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 EMC10Q5UCC4 262 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 SDHAF4Q5VUM1 108 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 ZCCHC8Q6NZY4 707 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 MYDGFQ969H8 173 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 SERHL2Q9H4I8 314 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 SERHLQ9NQF3 203 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 EIF2B3Q9NR50 452 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 AAASQ9NRG9 546 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 CNTN6Q9UQ52 1028 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 KAT6AQ92794 2004 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 TBKBP1A7MCY6 615 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 IFRD1O00458 451 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 KLF11O14901 512 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 MSI1O43347 362 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 GPIP06744 558 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 CNPP09543 421 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 BRCC3P46736 316 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 POLR2LP62875 67 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 NRG1Q02297 640 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 PRAMEF19Q5SWL8 479 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 LDB1Q86U70 411 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 ITIH5Q86UX2 942 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 DPP10Q8N608 796 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 TBATAQ96M53 351 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 VPS35Q96QK1 796 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 ARMC7Q9H6L4 198 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 ZNF395Q9H8N7 513 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 ST3GAL5Q9UNP4 418 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 TCAF1Q9Y4C2 921 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 POLR3HQ9Y535 204 aaPredicted RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 IPPQ9Y573 584 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 PCDHB9Q9Y5E1 797 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 CHRNGP07510 517 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 L1CAMP32004 1257 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 GRIA1P42261 906 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 ASPAP45381 313 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 LIPEQ05469 1076 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 MPP2Q14168 576 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 DPYSL2Q16555 572 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 REP15Q6BDI9 236 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 RHBDF2Q6PJF5 856 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 THAP5Q7Z6K1 395 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 DEPDC4Q8N2C3 294 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 TSPAN18Q96SJ8 248 aa11.54□□□□□ -0.56
PTCH1-203ENST00000375274 WDR12Q9GZL7 423 aaKnown RBP11.54□□□□□ -0.56
PTCH1-203ENST00000375274 FAM105AQ9NUU6 356 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms