RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 GRID2O43424 1007 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 LARGE1O95461 756 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ODC1P11926 461 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 RPS3P23396 243 aaKnown RBP eCLIP6.63□□□□□ -1.359e-7■■■□□ 14.6
UBR4-204ENST00000375254 ADAM8P78325 824 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 LIPMQ5VYY2 423 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 TPGS1Q6ZTW0 290 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 LNX2Q8N448 690 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 ASB9Q96DX5 294 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 B3GNT2Q9NY97 397 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 CIB4A0PJX0 185 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 FADS2O95864 444 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 BMP6P22004 513 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 RPS5P46782 204 aaKnown RBP6.63□□□□□ -1.35
UBR4-204ENST00000375254 TRABD2AQ86V40 505 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 HSPA12AO43301 675 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 CSTF2P33240 577 aaKnown RBP eCLIP6.63□□□□□ -1.35
UBR4-204ENST00000375254 CD81P60033 236 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 C16orf46Q6P387 395 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 LRRC69Q6ZNQ3 347 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 IGFN1Q86VF2 1251 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 TMEM199Q8N511 208 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 OR7G3Q8NG95 312 aa6.63□□□□□ -1.35
UBR4-204ENST00000375254 HSBP1L1C9JCN9 74 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ICMTO60725 284 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 RSL1D1O76021 490 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 HLA-EP13747 358 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 PTPAQ15257 358 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 BMT2Q1RMZ1 405 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ZIK1Q3SY52 487 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 INTS6LQ5JSJ4 861 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 HACD4Q5VWC8 232 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 SLC51BQ86UW2 128 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ACBD4Q8NC06 268 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 FANK1Q8TC84 345 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ITPAQ9BY32 194 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ACSS3Q9H6R3 686 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 PLEKHG3A1L390 1219 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 PEX11AO75192 247 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 VPS26AO75436 327 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ANXA8P13928 327 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 PEX3P56589 373 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 BST1Q10588 318 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 NME3Q13232 169 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 NLNQ9BYT8 704 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 TAS2R13Q9NYV9 303 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 L7N2F9 121 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 NNMTP40261 264 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 CLK3P49761 638 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 CERKLQ49MI3 558 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 GTF2IRD2BQ6EKJ0 949 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 USP30Q70CQ3 517 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 GTF2IRD2Q86UP8 949 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 CBWD2Q8IUF1 395 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 OR51B5Q9H339 312 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 WDR6Q9NNW5 1121 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 NIP7Q9Y221 180 aaKnown RBP eCLIP6.62□□□□□ -1.35
UBR4-204ENST00000375254 HLA-DPB1P04440 258 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 FDX1P10109 184 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 MAPTP10636 758 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 ARCN1P48444 511 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 CYCSP99999 105 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 RPA4Q13156 261 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 RFTN1Q14699 578 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 VSTM1Q6UX27 236 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 OR52L1Q8NGH7 329 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 UFD1Q92890 307 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 UBE2E3Q969T4 207 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ASIC4Q96FT7 647 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 LIN37Q96GY3 246 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 C12orf65Q9H3J6 166 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 ARHGAP20Q9P2F6 1191 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 SLC9A8Q9Y2E8 581 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 MBL2P11226 248 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 GRB14Q14449 540 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 RHOUQ7L0Q8 258 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 SLC34A3Q8N130 599 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 LZTR1Q8N653 840 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 HAPLN3Q96S86 360 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 OAS3Q9Y6K5 1087 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 ERCC6Q03468 1493 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 EMSYQ7Z589 1322 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 PCCAP05165 728 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 CCNYL3P0C7X3 344 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 SOX11P35716 441 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 NAPRTQ6XQN6 538 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ZNF571Q7Z3V5 609 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 ZUFSPQ96AP4 578 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 RRNAD1Q96FB5 475 aaKnown RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 TBATAQ96M53 351 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 RUSC1Q9BVN2 902 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 NKX1-2Q9UD57 310 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 PRR5-ARHGAP8B1AHC4 643 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 CD58P19256 250 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 DCKP27707 260 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 DCDC1P59894 354 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 ARHGAP8P85298 464 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 EN1Q05925 392 aaPredicted RBP6.62□□□□□ -1.35
UBR4-204ENST00000375254 KLF10Q13118 480 aa6.62□□□□□ -1.35
UBR4-204ENST00000375254 METTL4Q8N3J2 472 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms