RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 A0A1B0GVM2 712 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 TCAF2A6NFQ2 919 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 BOLA2-SMG1P6H3BVE0 249 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 ADAM12O43184 909 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 NPHS1O60500 1241 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 NDST3O95803 873 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 RHOCP08134 193 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 ATXN1LP0C7T5 689 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 CCL5P13501 91 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 AVPR1AP37288 418 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 ATN1P54259 1190 aaPredicted RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 TAS2R39P59534 338 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 DNAJB13P59910 316 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 DSG1Q02413 1049 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CMPK2Q5EBM0 449 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 C1orf53Q5VUE5 145 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 MRNIPQ6NTE8 343 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 EPGNQ6UW88 154 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 ZNF783Q6ZMS7 281 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CILP2Q8IUL8 1156 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CENPLQ8N0S6 344 aaPredicted RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 PGBD5Q8N414 524 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 UCMAQ8WVF2 138 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CMTM5Q96DZ9 223 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 MGME1Q9BQP7 344 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CLSTN3Q9BQT9 956 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 EBF4Q9BQW3 602 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CYP4F11Q9HBI6 524 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.23□□□□□ -1.09
UBR4-202ENST00000375224 CHD5Q8TDI0 1954 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 COCHO43405 550 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CRTAMO95727 393 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 GLP2RO95838 553 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 FOSL1P15407 271 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 HMGA1P17096 107 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 PRDX6P30041 224 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 SLC6A4P31645 630 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 PGM1P36871 562 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 GRIA4P48058 902 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 RPL14P50914 215 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 GALK1P51570 392 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 ACVR1Q04771 509 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 TUBB3Q13509 450 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 LRP8Q14114 963 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 PDCD4Q53EL6 469 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 ADGRF1Q5T601 910 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 FAM45BPQ6NSW5 357 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 DENND1CQ8IV53 801 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 AFAP1L2Q8N4X5 818 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 OR13J1Q8NGT2 312 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 GPR150Q8NGU9 434 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 FAM45AQ8TCE6 357 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 NXNL1Q96CM4 212 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 PRR11Q96HE9 360 aaPredicted RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 PSKH2Q96QS6 385 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 MIPEPQ99797 713 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 OMDQ99983 421 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 DCLRE1BQ9H816 532 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 INIPQ9NRY2 104 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 QPCTLQ9NXS2 382 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 STK39Q9UEW8 545 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 ABHD14A-ACY1A0A1B0GW23 586 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 TK2O00142 265 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 ZNF195O14628 629 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 GJB5O95377 273 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 LTA4HP09960 611 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 RPL17P18621 184 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 ATP5F1P24539 256 aaPredicted RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 VARSP26640 1264 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 CORO1AP31146 461 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 TLE2Q04725 743 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 DCTN2Q13561 401 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 RFWD3Q6PCD5 774 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CNSTQ6PJW8 725 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.23□□□□□ -1.098e-7■□□□□ 9.2
UBR4-202ENST00000375224 PIWIL4Q7Z3Z4 852 aaKnown RBP8.23□□□□□ -1.09
UBR4-202ENST00000375224 TREML1Q86YW5 311 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CEP97Q8IW35 865 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CFAP52Q8N1V2 620 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 TMEM151AQ8N4L1 468 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 ZNF781Q8N8C0 355 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 HDAC10Q969S8 669 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 SPON2Q9BUD6 331 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 COG4Q9H9E3 785 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 NCKIPSDQ9NZQ3 722 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 XPR1Q9UBH6 696 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 VWA7Q9Y334 891 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 YIPF1Q9Y548 306 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 CEP350Q5VT06 3117 aa8.23□□□□□ -1.09
UBR4-202ENST00000375224 GOLGA8QA0A0J9YX86 632 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TYW5A2RUC4 315 aaKnown RBP8.22□□□□□ -1.09
UBR4-202ENST00000375224 GOLGA8OA6NCC3 632 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 PRR5-ARHGAP8B1AHC4 643 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 TARM1B6A8C7 271 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 GOLGA8NF8WBI6 632 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 HDAC3O15379 428 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 LDB2O43679 373 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 EFCAB14O75071 495 aa8.22□□□□□ -1.09
UBR4-202ENST00000375224 RPP40O75818 363 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms