RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 TMEM150BA6NC51 233 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 SMAD6O43541 496 aaKnown RBP4.77□□□□□ -1.65
PMS1-202ENST00000374826 STX6O43752 255 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 CD4P01730 458 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 OR52Z1P0C646 297 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 PSG1P11464 419 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 ALADP13716 330 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 ITGB8P26012 769 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 PRKCEQ02156 737 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 CYP4A11Q02928 519 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 NSUN2Q08J23 767 aaKnown RBP eCLIP4.77□□□□□ -1.65
PMS1-202ENST00000374826 PPFIA1Q13136 1202 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 PKP1Q13835 747 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 PLCB4Q15147 1175 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 PTGISQ16647 500 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 FAM209BQ5JX69 171 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 FAM173BQ6P4H8 233 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 FBXO38Q6PIJ6 1188 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 ANKRD33Q7Z3H0 272 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 SMAP1Q8IYB5 467 aaPredicted RBP4.77□□□□□ -1.65
PMS1-202ENST00000374826 RBMXL3Q8N7X1 1067 aaKnown RBP4.77□□□□□ -1.65
PMS1-202ENST00000374826 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 GLMPQ8WWB7 406 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 PMM1Q92871 262 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 ZNF845Q96IR2 970 aaPredicted RBP4.77□□□□□ -1.65
PMS1-202ENST00000374826 CTAGE1Q96RT6 745 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 RIT2Q99578 217 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 NAP1L4Q99733 375 aaKnown RBP4.77□□□□□ -1.65
PMS1-202ENST00000374826 NUDT22Q9BRQ3 303 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 GATA5Q9BWX5 397 aaPredicted RBP4.77□□□□□ -1.65
PMS1-202ENST00000374826 FTOQ9C0B1 505 aaKnown RBP eCLIP4.77□□□□□ -1.65
PMS1-202ENST00000374826 SMARCAD1Q9H4L7 1026 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 CDCP1Q9H5V8 836 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 TTC12Q9H892 705 aaPredicted RBP4.77□□□□□ -1.65
PMS1-202ENST00000374826 ZNF302Q9NR11 478 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 SETD4Q9NVD3 440 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 ERAP1Q9NZ08 941 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 TBX21Q9UL17 535 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 MTMR6Q9Y217 621 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 VWA8A3KMH1 1905 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 SCN1AP35498 2009 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 DOCK6Q96HP0 2047 aa4.77□□□□□ -1.65
PMS1-202ENST00000374826 ZNF638Q14966 1978 aaKnown RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 IGKV6D-21A0A0A0MT36 114 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 C17orf102A2RUQ5 167 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 RASA4BC9J798 803 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 CTIFO43310 598 aaKnown RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 RASA4O43374 803 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 BAG4O95429 457 aaKnown RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 SRGAP2BP0DMP2 458 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 TFEBP19484 476 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 SLC8A1P32418 973 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 TECP42680 631 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 SOX2P48431 317 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 TRAPPC10P48553 1259 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 CCL23P55773 120 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 B4GALNT1Q00973 533 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 CEBPZQ03701 1054 aaKnown RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 PPP2R5CQ13362 524 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 CTTNQ14247 550 aaKnown RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 BECN1Q14457 450 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 MAPKAPK3Q16644 382 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 LONRF1Q17RB8 773 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 RILPL1Q5EBL4 403 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 PLA2G4FQ68DD2 849 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 KYAT3Q6YP21 454 aaKnown RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 PLPPR4Q7Z2D5 763 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 C11orf96Q7Z7L8 435 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 RFX6Q8HWS3 928 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 AFAP1L1Q8TED9 768 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 ATP8B4Q8TF62 1192 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 BADQ92934 168 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 ATP6V0A1Q93050 837 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 ZNF566Q969W8 418 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 RIPOR3Q96MK2 946 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 FAM20AQ96MK3 541 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 MTMR9Q96QG7 549 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 LBHD1Q9BQE6 289 aaPredicted RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 LXNQ9BS40 222 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 TTLL2Q9BWV7 592 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 FAM49AQ9H0Q0 323 aaPredicted RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 HIPK3Q9H422 1215 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 MOV10Q9HCE1 1003 aaKnown RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 WRAP73Q9P2S5 460 aaPredicted RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 TUBE1Q9UJT0 475 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 PCDHA12Q9UN75 941 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 PCDHA10Q9Y5I2 948 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 TCF20Q9UGU0 1960 aaKnown RBP4.76□□□□□ -1.65
PMS1-202ENST00000374826 COL1A2P08123 1366 aa4.76□□□□□ -1.65
PMS1-202ENST00000374826 NRCAMQ92823 1304 aa4.75□□□□□ -1.65
PMS1-202ENST00000374826 PLXNA3P51805 1871 aa4.75□□□□□ -1.65
PMS1-202ENST00000374826 C2orf16Q68DN1 1984 aa4.75□□□□□ -1.65
PMS1-202ENST00000374826 A0A087WWV3 80 aa4.75□□□□□ -1.65
PMS1-202ENST00000374826 ANO9A1A5B4 782 aa4.75□□□□□ -1.65
PMS1-202ENST00000374826 VWA3AA6NCI4 1184 aa4.75□□□□□ -1.65
PMS1-202ENST00000374826 PP2D1A8MPX8 630 aa4.75□□□□□ -1.65
PMS1-202ENST00000374826 F8W810 466 aa4.75□□□□□ -1.65
PMS1-202ENST00000374826 M0QZQ0 153 aa4.75□□□□□ -1.65
PMS1-202ENST00000374826 GTPBP1O00178 669 aaKnown RBP4.75□□□□□ -1.65
PMS1-202ENST00000374826 PODXLO00592 558 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms