RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 AHI1Q8N157 1196 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 PTGR2Q8N8N7 351 aaPredicted RBP12.13□□□□□ -0.47
NCDN-202ENST00000373243 GPR152Q8TDT2 470 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 TMEM174Q8WUU8 243 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 OMA1Q96E52 524 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 SORT1Q99523 831 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 C1orf50Q9BV19 199 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 SLC25A23Q9BV35 468 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 POLR1BQ9H9Y6 1135 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 SPAG4Q9NPE6 437 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 DDX28Q9NUL7 540 aaKnown RBP12.13□□□□□ -0.47
NCDN-202ENST00000373243 OXSMQ9NWU1 459 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 BAG5Q9UL15 447 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 RNF112Q9ULX5 631 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 ERVK-11Q9UQG0 969 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 NDUFAF1Q9Y375 327 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 SPEF1Q9Y4P9 236 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 OR51F1A6NGY5 319 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 PSMD3O43242 534 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 KATNA1O75449 491 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 PFKMP08237 780 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 LILRA4P59901 499 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 DNASE1L3Q13609 305 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 GRAMD2AQ8IUY3 354 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 MARVELD2Q8N4S9 558 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 CBR4Q8N4T8 237 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 NAT16Q8N8M0 369 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 ANKK1Q8NFD2 765 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 OR7G1Q8NGA0 311 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 THUMPD3Q9BV44 507 aaKnown RBP12.13□□□□□ -0.47
NCDN-202ENST00000373243 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 CDK5RAP2Q96SN8 1893 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 RRN3P2A6NIE6 340 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 PTGES3LE9PB15 166 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 NRP2O60462 931 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 TOMM70O94826 608 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 JUNP05412 331 aaKnown RBP12.13□□□□□ -0.47
NCDN-202ENST00000373243 RBP1P09455 135 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 BRCC3P46736 316 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 XIAPP98170 497 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 ZYG11AQ6WRX3 759 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 ZNF534Q76KX8 674 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 SNX29P2Q8IUI4 249 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 LRRC52Q8N7C0 313 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 ADCY4Q8NFM4 1077 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 B3GALT6Q96L58 329 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 C12orf4Q9NQ89 552 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 NDFIP2Q9NV92 336 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
NCDN-202ENST00000373243 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.13□□□□□ -0.47
NCDN-202ENST00000373243 TRAF6Q9Y4K3 522 aa12.13□□□□□ -0.47
NCDN-202ENST00000373243 SF3B1O75533 1304 aaKnown RBP eCLIP12.13□□□□□ -0.47
NCDN-202ENST00000373243 MYCP01106 439 aaPredicted RBP12.12□□□□□ -0.47
NCDN-202ENST00000373243 HGFP14210 728 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 ITGB6P18564 788 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 ATP6V1B2P21281 511 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 WNT3AP56704 352 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 SNAPC2Q13487 334 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 GNASQ5JWF2 1037 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 RBM20Q5T481 1227 aaKnown RBP12.12□□□□□ -0.47
NCDN-202ENST00000373243 MARC1Q5VT66 337 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 ARHGAP36Q6ZRI8 547 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 STK32CQ86UX6 486 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 ALDH16A1Q8IZ83 802 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 DLG3Q92796 817 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 EXOC2Q96KP1 924 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 CITED4Q96RK1 184 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 CCDC162PA2VCL2 907 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 DAB1O75553 588 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 MFN2O95140 757 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 CRYZL1O95825 349 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 NCK1P16333 377 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 TUBA4AP68366 448 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 HSF5Q4G112 596 aaPredicted RBP12.12□□□□□ -0.47
NCDN-202ENST00000373243 PKN3Q6P5Z2 889 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 FAM35AQ86V20 835 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 CANT1Q8WVQ1 401 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 ISOC1Q96CN7 298 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 C12orf42Q96LP6 360 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 IGSF9Q9P2J2 1179 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 SNX5Q9Y5X3 404 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 SCN9AQ15858 1988 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 RNASEH2AO75792 299 aaKnown RBP12.12□□□□□ -0.47
NCDN-202ENST00000373243 SIX3O95343 332 aaPredicted RBP12.12□□□□□ -0.47
NCDN-202ENST00000373243 HSPA1AP0DMV8 641 aaKnown RBP12.12□□□□□ -0.47
NCDN-202ENST00000373243 HSPA1BP0DMV9 641 aaKnown RBP12.12□□□□□ -0.47
NCDN-202ENST00000373243 CPOXP36551 454 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 YAP1P46937 504 aaKnown RBP12.12□□□□□ -0.47
NCDN-202ENST00000373243 INCA1Q0VD86 236 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 FGD3Q5JSP0 725 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 MAVSQ7Z434 540 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 DTX3Q8N9I9 347 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 SPERTQ8NA61 448 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 ARNTL2Q8WYA1 636 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 FCRL2Q96LA5 508 aaPredicted RBP12.12□□□□□ -0.47
NCDN-202ENST00000373243 APOL5Q9BWW9 433 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 ANKRD6Q9Y2G4 727 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 PPME1Q9Y570 386 aa12.12□□□□□ -0.47
NCDN-202ENST00000373243 NUP205Q92621 2012 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms