RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 KCNQ1P51787 676 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 TKTL1P51854 596 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 GBE1Q04446 702 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 ADIGQ0VDE8 80 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 SLC10A2Q12908 348 aaPredicted RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 TAF10Q12962 218 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 USP4Q13107 963 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 CEACAM7Q14002 265 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 LSM12Q3MHD2 195 aaKnown RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 LIPMQ5VYY2 423 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 NCBP2-AS2Q69YL0 99 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 GET4Q7L5D6 327 aaPredicted RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 CARM1Q86X55 608 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 TMC8Q8IU68 726 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 LILRA2Q8N149 483 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 TRIML2Q8N7C3 387 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 ITFG1Q8TB96 612 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 MAPK15Q8TD08 544 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 ADAMTS16Q8TE57 1224 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 NDRG1Q92597 394 aaKnown RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 KHSRPQ92945 711 aaKnown RBP eCLIP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 FBXO32Q969P5 355 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 CSPG4P5Q96PW8 444 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 CCT7Q99832 543 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 GATA5Q9BWX5 397 aaPredicted RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 LRRC3Q9BY71 257 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 SHCBP1LQ9BZQ2 653 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 COPS7BQ9H9Q2 264 aaPredicted RBP11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 NMRAL1Q9HBL8 299 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 C8orf4Q9NR00 106 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 FAIMQ9NVQ4 179 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 GPATCH2LQ9NWQ4 482 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 DTLQ9NZJ0 730 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 SARDHQ9UL12 918 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 SLC8A2Q9UPR5 921 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 CDYLQ9Y232 598 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 MYRFQ9Y2G1 1151 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 RAD54BQ9Y620 910 aa11.5□□□□□ -0.57
TSPAN1-201ENST00000372003 A0A096LPK6 155 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TRPC5OSA6NMA1 111 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 H3BNH8 94 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 ZNF197O14709 1029 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 ZMPSTE24O75844 475 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 PAPLNO95428 1278 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 IL9P15248 144 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 ATP6V1B1P15313 513 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 ARL4AP40617 200 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 CYP4F8P98187 520 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 PDK1Q15118 436 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 KCTD21Q4G0X4 260 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 RWDD4Q6NW29 188 aaKnown RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 IYDQ6PHW0 289 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 POTEHQ6S545 545 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 GAREM2Q75VX8 874 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 SLC26A9Q7LBE3 791 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 STRADAQ7RTN6 431 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TMEM135Q86UB9 458 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 SIX6OS1Q8N1H7 587 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 PACRGLQ8N7B6 248 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TERB1Q8NA31 727 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 ST13P5Q8NFI4 369 aaPredicted RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 KCTD13Q8WZ19 329 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 SUSD6Q92537 303 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 MYRFLQ96LU7 910 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 CEP295NLQ96MC4 621 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 NECTIN4Q96NY8 510 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 OR52B2Q96RD2 323 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 EFHD1Q9BUP0 239 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 ULBP1Q9BZM6 244 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 FBXO44Q9H4M3 255 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 IL21Q9HBE4 155 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 DDX18Q9NVP1 670 aaKnown RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 UXTQ9UBK9 157 aaPredicted RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 APPL1Q9UKG1 709 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 AP4E1Q9UPM8 1137 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 USP3Q9Y6I4 520 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 SH3PXD2BA1X283 911 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 GABBR2O75899 941 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 F11P03951 625 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 IDO1P14902 403 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 CEBPBP17676 345 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TTKP33981 857 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 RPL34P49207 117 aaKnown RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 EPHA5P54756 1037 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 CDKL1Q00532 357 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 MS4A2Q01362 244 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 RHDQ02161 417 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 NSUN2Q08J23 767 aaKnown RBP eCLIP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TEAD2Q15562 447 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 AAK1Q2M2I8 961 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 RAB6CQ53S08 254 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 PPP6R3Q5H9R7 873 aaPredicted RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 PPM1JQ5JR12 505 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 RAB41Q5JT25 222 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 PRSS36Q5K4E3 855 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 C6orf52Q5T4I8 152 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 NAPRTQ6XQN6 538 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 Q6ZNX1 250 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TMEM150AQ86TG1 271 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms