RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 PQLC1Q8N2U9 271 aa28.44■■■□□ 2.14
SDCCAG3-204ENST00000371725 SMG9Q9H0W8 520 aaKnown RBP28.44■■■□□ 2.14
SDCCAG3-204ENST00000371725 VTI1BQ9UEU0 232 aa28.44■■■□□ 2.14
SDCCAG3-204ENST00000371725 REV3LO60673 3130 aa28.44■■■□□ 2.14
SDCCAG3-204ENST00000371725 H3BNC9 293 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 RAMP2O60895 175 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 PBX2P40425 430 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 MAGEA10P43363 369 aaPredicted RBP28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 ZNF33AQ06730 810 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 DYNC1I2Q13409 638 aaKnown RBP28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 POLD3Q15054 466 aaPredicted RBP28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 PDK3Q15120 406 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 PABPC5Q96DU9 382 aaKnown RBP28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 CHRAC1Q9NRG0 131 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 ACTL7AQ9Y615 435 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 DENRO43583 198 aaKnown RBP28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 CHN2P52757 468 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 SLC10A7Q0GE19 358 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 PRKAA1Q13131 559 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 HERC3Q15034 1050 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 LSM12Q3MHD2 195 aaKnown RBP28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 C5orf22Q49AR2 442 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 PABPC1LQ4VXU2 614 aaKnown RBP28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 PPM1LQ5SGD2 360 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 UGT2A3Q6UWM9 527 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 ACVR1CQ8NER5 493 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 IARS2Q9NSE4 1012 aaKnown RBP28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 TLK1Q9UKI8 766 aa28.43■■■□□ 2.14
SDCCAG3-204ENST00000371725 TTC24A2A3L6 582 aaPredicted RBP28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 C5orf67F2Z3F1 127 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 ATP9BO43861 1147 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 GREM1O60565 184 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 OLFM2O95897 454 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 SBK3P0C264 359 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 TFEBP19484 476 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 MPSTP25325 297 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 SERPINB5P36952 375 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 FOLH1Q04609 750 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 ZNF697Q5TEC3 545 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 ZFP1Q6P2D0 407 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 DSELQ8IZU8 1212 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 TCEAL4Q96EI5 215 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 CPSF2Q9P2I0 782 aaKnown RBP28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 BCAP29Q9UHQ4 241 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 YBX2Q9Y2T7 364 aaKnown RBP28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 DTNAQ9Y4J8 743 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 C5orf42Q9H799 3197 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 GRID2O43424 1007 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 CKMP06732 381 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 CHRNGP07510 517 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 COL6A2P12110 1019 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 GRIA4P48058 902 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 CLCN2P51788 898 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 MAXP61244 160 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 CYLC2Q14093 348 aaPredicted RBP28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 ADGRF1Q5T601 910 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 RBM23Q86U06 439 aaKnown RBP28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 ZC3HC1Q86WB0 502 aaKnown RBP28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 SNX32Q86XE0 403 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 KLHDC8BQ8IXV7 354 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 OR7D4Q8NG98 312 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 MRPS31Q92665 395 aaKnown RBP28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 KIFC1Q9BW19 673 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 RHOJQ9H4E5 214 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 EPB41L1Q9H4G0 881 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 WDR55Q9H6Y2 383 aaPredicted RBP28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 SLC39A10Q9ULF5 831 aa28.42■■■□□ 2.14
SDCCAG3-204ENST00000371725 CHD5Q8TDI0 1954 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 AIM2O14862 343 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 PSMD3O43242 534 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 ABCG1P45844 678 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 NUDT2P50583 147 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 GRM3Q14832 879 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 MARVELD2Q8N4S9 558 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 BHMTQ93088 406 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 TASP1Q9H6P5 420 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 SP110Q9HB58 689 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 GLOD4Q9HC38 313 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 NDUFA13Q9P0J0 144 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 COMMD3-BMI1R4GMX3 469 aa28.41■■■□□ 2.14
SDCCAG3-204ENST00000371725 ANKRD33BA6NCL7 494 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 POLD2P49005 469 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 ZNF423Q2M1K9 1284 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 PIGGQ5H8A4 983 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 ARL13AQ5H913 290 aaPredicted RBP28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 TIGD7Q6NT04 549 aaPredicted RBP28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 STYXQ8WUJ0 223 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 RWDD3Q9Y3V2 267 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 GOLGA8QA0A0J9YX86 632 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 GOLGA8OA6NCC3 632 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 GOLGA8NF8WBI6 632 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 PPARGP37231 505 aaPredicted RBP28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 ETFBP38117 255 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 CDH17Q12864 832 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 SERINC3Q13530 473 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 GRAMD1BQ3KR37 738 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 ELMOD1Q8N336 334 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 TSNARE1Q96NA8 513 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 NT5MQ9NPB1 228 aa28.4■■■□□ 2.14
SDCCAG3-204ENST00000371725 ASAH2Q9NR71 780 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms