RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 AP1M1Q9BXS5 423 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 SMARCAL1Q9NZC9 954 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 CDV3Q9UKY7 258 aaKnown RBP14.85□□□□□ -0.03
COL9A1-204ENST00000370496 TTC7AQ9ULT0 858 aaPredicted RBP14.85□□□□□ -0.03
COL9A1-204ENST00000370496 SNX11Q9Y5W9 270 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 SCN8AQ9UQD0 1980 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 POM121BA6NF01 834 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 ZNF185O15231 689 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 FGF1P05230 155 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 C1SP09871 688 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 PIRTP0C851 137 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 ETV3P41162 512 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 CTSKP43235 329 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 NXPH1P58417 271 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 BNC1Q01954 994 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 AGERQ15109 404 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 PARP6Q2NL67 630 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 WSCD2Q2TBF2 565 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 SIRPB2Q5JXA9 342 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 CRTC1Q6UUV9 634 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 LYSMD3Q7Z3D4 306 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 HSD11B1LQ7Z5J1 315 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 PRELID2Q8N945 189 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 CCHCR1Q8TD31 782 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 ACTRT1Q8TDG2 376 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 CENPTQ96BT3 561 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 DTD2Q96FN9 168 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 CAPZA3Q96KX2 299 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 COQ10AQ96MF6 247 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 LYSMD1Q96S90 227 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 GAREM1Q9H706 876 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 MBNL1Q9NR56 388 aaKnown RBP14.85□□□□□ -0.03
COL9A1-204ENST00000370496 KCTD5Q9NXV2 234 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 ZNF711Q9Y462 761 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 HS3ST3A1Q9Y663 406 aa14.85□□□□□ -0.03
COL9A1-204ENST00000370496 A0A0U1RQS6 177 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 E7EVH7 732 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 CLDN7O95471 211 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 EPOP01588 193 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 ATXN1LP0C7T5 689 aaKnown RBP14.84□□□□□ -0.03
COL9A1-204ENST00000370496 GM2AP17900 193 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 CHRNA4P43681 627 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 LMAN1P49257 510 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 STC1P52823 247 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 THOP1P52888 689 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 PDE1CQ14123 709 aaPredicted RBP14.84□□□□□ -0.03
COL9A1-204ENST00000370496 SLC1A5Q15758 541 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 HLA-BQ31612 363 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 UAP1L1Q3KQV9 507 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 STPG1Q5TH74 334 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 KDM7AQ6ZMT4 941 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 Q6ZSR6 202 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 SRPK1Q96SB4 655 aaKnown RBP14.84□□□□□ -0.03
COL9A1-204ENST00000370496 TBL1YQ9BQ87 522 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 APOL2Q9BQE5 337 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 GPR63Q9BZJ6 419 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 LRRC40Q9H9A6 602 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 PKD2L2Q9NZM6 624 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 PAK5Q9P286 719 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 CD84Q9UIB8 345 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 SHOC2Q9UQ13 582 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 SAR1BQ9Y6B6 198 aa14.84□□□□□ -0.03
COL9A1-204ENST00000370496 LOC285095A0A1B0GVY8 99 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 C4orf47A7E2U8 309 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 METTL18O95568 372 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 AGTP01019 485 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 CASQ1P31415 396 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 FDFT1P37268 417 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 KCNJ1P48048 391 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 CCT8P50990 548 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 MTM1Q13496 603 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 PAPD7Q5XG87 772 aaKnown RBP14.83□□□□□ -0.04
COL9A1-204ENST00000370496 RAET1GQ6H3X3 334 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 Q6ZVL8 140 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 SLC22A18ASQ8N1D0 253 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 OXR1Q8N573 874 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 BLOC1S5Q8TDH9 187 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 MAGOHBQ96A72 148 aaKnown RBP14.83□□□□□ -0.04
COL9A1-204ENST00000370496 BMFQ96LC9 184 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 WDR26Q9H7D7 661 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 ZFYVE1Q9HBF4 777 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 MAGEE1Q9HCI5 957 aa14.83□□□□□ -0.04
COL9A1-204ENST00000370496 DRG1Q9Y295 367 aaKnown RBP14.83□□□□□ -0.04
COL9A1-204ENST00000370496 FNDC3AQ9Y2H6 1198 aaKnown RBP14.83□□□□□ -0.04
COL9A1-204ENST00000370496 MYLKQ15746 1914 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 PHF2O75151 1096 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 USP12O75317 370 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 ETS1P14921 441 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 TSHRP16473 764 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 ARRB1P49407 418 aaPredicted RBP14.82□□□□□ -0.04
COL9A1-204ENST00000370496 LIMK1P53667 647 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 PFN3P60673 137 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 ETF1P62495 437 aaKnown RBP14.82□□□□□ -0.04
COL9A1-204ENST00000370496 YPEL5P62699 121 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 IL9RQ01113 521 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 PTSQ03393 145 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 OLIG2Q13516 323 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 SPARCL1Q14515 664 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 INPP5AQ14642 412 aa14.82□□□□□ -0.04
COL9A1-204ENST00000370496 HS1BP3Q53T59 392 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms