RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 LMAN2LQ9H0V9 348 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 DNMT3LQ9UJW3 386 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 CORO1CQ9ULV4 474 aaPredicted RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 AP4B1Q9Y6B7 739 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 PNPLA6Q8IY17 1366 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 UGT2B11O75310 529 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 RB1P06400 928 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 CES1P23141 567 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 TYSND1Q2T9J0 566 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 SMU1Q2TAY7 513 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 SPATA6LQ8N4H0 392 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 EIF1ADQ8N9N8 165 aaKnown RBP12.48□□□□□ -0.41
HCFC1-202ENST00000369984 OR2L5Q8NG80 312 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 NKX2-3Q8TAU0 364 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 GPER1Q99527 375 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 NPAS2Q99743 824 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 EHD4Q9H223 541 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 XPR1Q9UBH6 696 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 SH3D21A4FU49 640 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 AMIGO2Q86SJ2 522 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 CCNB1IP1Q9NPC3 277 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 SNX7Q9UNH6 387 aa12.48□□□□□ -0.41
HCFC1-202ENST00000369984 XYLBO75191 536 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 SDC2P34741 201 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 MANFP55145 182 aaKnown RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 CDYL2Q8N8U2 506 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 BAP1Q92560 729 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 AIFM2Q9BRQ8 373 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 C2orf49Q9BVC5 232 aaPredicted RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 IL25Q9H293 177 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 INTS7Q9NVH2 962 aaKnown RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 TRNAU1APQ9NX07 287 aaKnown RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 U3KQV3 271 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 FAM205AQ6ZU69 1335 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 BANF1O75531 89 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 OR8H1Q8NGG4 311 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 ACMSDQ8TDX5 336 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 ACTL7BQ9Y614 415 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 LIASO43766 372 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 LDOC1O95751 146 aaPredicted RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 KLRK1P26718 216 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 MNDAP41218 407 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 SCIMPQ6UWF3 145 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 POP5Q969H6 163 aaKnown RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 RCN3Q96D15 328 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 ZNF221Q9UK13 617 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 RAP2CQ9Y3L5 183 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 PCDHGB3Q9Y5G1 929 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 AP5Z1O43299 807 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 NTSR2O95665 410 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 NR2F6P10588 404 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 GLRA2P23416 452 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 AXLP30530 894 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 ATP5C1P36542 298 aaKnown RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 FAM183BPQ6ZVS7 135 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 ZNF410Q86VK4 478 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 RDH11Q8TC12 318 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 PNMA5Q96PV4 448 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 BRD9Q9H8M2 597 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 CLUHO75153 1309 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 H0Y858 1186 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 SLC22A3O75751 556 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 CDK9P50750 372 aaKnown RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 FSCN1Q16658 493 aaKnown RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 MPPE1Q53F39 396 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 RASGEF1AQ8N9B8 481 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 OR52K2Q8NGK3 314 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 ABCG8Q9H221 673 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 DDX3YO15523 660 aaKnown RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 ABL2P42684 1182 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 TNFAIP8L3Q5GJ75 292 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 OTOP1Q7RTM1 612 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 ASB7Q9H672 318 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 TNFSF13BQ9Y275 285 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 TBC1D3BA6NDS4 549 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 SAGE2PA6NJ88 616 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 RGS10O43665 173 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 CCNKO75909 580 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 HNRNPLP14866 589 aaKnown RBP eCLIP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 HNF4AP41235 474 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 TBX2Q13207 712 aaPredicted RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 ANXA8L1Q5VT79 327 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 REPS2Q8NFH8 660 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 SUSD6Q92537 303 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 C1GALT1C1Q96EU7 318 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 C11orf24Q96F05 449 aaPredicted RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 RTKNQ9BST9 563 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 TRPV5Q9NQA5 729 aa12.47□□□□□ -0.41
HCFC1-202ENST00000369984 PRPF19Q9UMS4 504 aaKnown RBP12.47□□□□□ -0.41
HCFC1-202ENST00000369984 NDUFS2O75306 463 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 NADKO95544 446 aaPredicted RBP12.46□□□□□ -0.41
HCFC1-202ENST00000369984 METTL18O95568 372 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 ZNF730Q6ZMV8 503 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 TMEM150BA6NC51 233 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 IST1P53990 364 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 PRKG2Q13237 762 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 ZNF563Q8TA94 476 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 SPATC1LQ9H0A9 340 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms