RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 SEMA3AQ14563 771 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 PTPRNQ16849 979 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 PARM1Q6UWI2 310 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 CPA6Q8N4T0 437 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 ARMC2Q8NEN0 867 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 FGF14Q92915 247 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 ELMO2Q96JJ3 720 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 CPEB1Q9BZB8 566 aaKnown RBP16.82■□□□□ 0.28
PHGDH-202ENST00000369409 ZMYND15Q9H091 742 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 SUV39H2Q9H5I1 410 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 FNDC3AQ9Y2H6 1198 aaKnown RBP16.82■□□□□ 0.28
PHGDH-202ENST00000369409 MTCH2Q9Y6C9 303 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 CAPN8A6NHC0 703 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 PRRT4C9JH25 899 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 PHGDHO43175 533 aaKnown RBP16.82■□□□□ 0.28
PHGDH-202ENST00000369409 MPOP05164 745 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 SRPRAP08240 638 aaKnown RBP16.82■□□□□ 0.28
PHGDH-202ENST00000369409 PRSS56P0CW18 603 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 LAMP2P13473 410 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 TAC1P20366 129 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 PSMA3P25788 255 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 LTBRP36941 435 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 SERPINB4P48594 390 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 IRF9Q00978 393 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 RBM20Q5T481 1227 aaKnown RBP16.82■□□□□ 0.28
PHGDH-202ENST00000369409 N4BP2L1Q5TBK1 243 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-202ENST00000369409 NAIF1Q69YI7 327 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-202ENST00000369409 MRNIPQ6NTE8 343 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 RAPH1Q70E73 1250 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 CPLX4Q7Z7G2 160 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 GALNT7Q86SF2 657 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 ZNF366Q8N895 744 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 GPR150Q8NGU9 434 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 LRRC8CQ8TDW0 803 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 ECHDC3Q96DC8 303 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 CABS1Q96KC9 395 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 NDNQ99608 321 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 TTYH1Q9H313 450 aaPredicted RBP16.82■□□□□ 0.28
PHGDH-202ENST00000369409 MTG2Q9H4K7 406 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 ELOVL2Q9NXB9 296 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 GTSE1Q9NYZ3 720 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 SLC8A2Q9UPR5 921 aa16.82■□□□□ 0.28
PHGDH-202ENST00000369409 C1orf232A0A0U1RR37 186 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 S1PR4O95977 384 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 C2P06681 752 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 PSMC3P17980 439 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 OGNP20774 298 aaKnown RBP16.81■□□□□ 0.28
PHGDH-202ENST00000369409 MTHFRP42898 656 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 CLCN5P51795 746 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 RUNX3Q13761 415 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 ZNF460Q14592 562 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 GRIN2CQ14957 1233 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 FASTKD1Q53R41 847 aaKnown RBP16.81■□□□□ 0.28
PHGDH-202ENST00000369409 C16orf46Q6P387 395 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 ELSPBP1Q96BH3 223 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 EID2BQ96D98 161 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 FGFR1OP2Q9NVK5 253 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 DCDC2Q9UHG0 476 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 EMCNQ9ULC0 261 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 PKP3Q9Y446 797 aa16.81■□□□□ 0.28
PHGDH-202ENST00000369409 WASH3PC4AMC7 463 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 MC4RP32245 332 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 HNF1BP35680 557 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 CSRP3P50461 194 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 STC1P52823 247 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 ST8SIA6P61647 398 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 IRX4P78413 519 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 TAF1BQ53T94 588 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-202ENST00000369409 CEP97Q8IW35 865 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 SFTPA1Q8IWL2 248 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 PLPP6Q8IY26 295 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 PLD6Q8N2A8 252 aaKnown RBP16.8■□□□□ 0.28
PHGDH-202ENST00000369409 MICALL1Q8N3F8 863 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 MSLNLQ96KJ4 702 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 ZNF641Q96N77 438 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-202ENST00000369409 NSRP1Q9H0G5 558 aaKnown RBP16.8■□□□□ 0.28
PHGDH-202ENST00000369409 ZFYVE1Q9HBF4 777 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 ZNF358Q9NW07 568 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 IL17CQ9P0M4 197 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 PHTF1Q9UMS5 762 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 NPIPB15A6NHN6 443 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-202ENST00000369409 SLC35E2BP0CK96 405 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 STMN1P16949 149 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 GDI1P31150 447 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 HMGCLP35914 325 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 OPRD1P41143 372 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 VASPP50552 380 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-202ENST00000369409 TAS2R39P59534 338 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 RAB10P61026 200 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 SEMG2Q02383 582 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 ADGRE1Q14246 886 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 TYSND1Q2T9J0 566 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 GDPD4Q6W3E5 623 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 FAM47EQ6ZV65 393 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 CLEC14AQ86T13 490 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 TERB1Q8NA31 727 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 CCDC63Q8NA47 563 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 KLHL32Q96NJ5 620 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 OMDQ99983 421 aa16.8■□□□□ 0.28
PHGDH-202ENST00000369409 HEPHQ9BQS7 1158 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms