RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 TNFSF13BQ9Y275 285 aa6.6□□□□□ -1.35
ECHDC1-202ENST00000368289 MTCL1Q9Y4B5 1905 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-202ENST00000368289 TACC2O95359 2948 aa6.6□□□□□ -1.35
ECHDC1-202ENST00000368289 COL1A2P08123 1366 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 CITO14578 2027 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 LRRD1A4D1F6 860 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 TMEM150BA6NC51 233 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 SGK1O00141 431 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MCF2LO15068 1137 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 TYROBPO43914 113 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 DLX3O60479 287 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 DNAJC6O75061 913 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 SOD2P04179 222 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 PRKCBP05771 671 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 FAM163BP0C2L3 166 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MCF2P10911 925 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 BCKDHBP21953 392 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 TGM2P21980 687 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 PSMA2P25787 234 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MSH2P43246 934 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 SSR1P43307 286 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MAGEA6P43360 314 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 IFNAR2P48551 515 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MYL6P60660 151 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 NCALDP61601 193 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 SARNPP82979 210 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 CAPSQ13938 189 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 TESK1Q15569 626 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 SF1Q15637 639 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 KCNMB1Q16558 191 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ZNF699Q32M78 642 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 CCDC38Q502W7 563 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ZNF667Q5HYK9 610 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ZNF484Q5JVG2 852 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ZFYVE27Q5T4F4 411 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 STXBP5Q5T5C0 1151 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ZNF449Q6P9G9 518 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MFSD7Q6UXD7 560 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 VITQ6UXI7 678 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ZSWIM9Q86XI8 627 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 PALM2Q8IXS6 379 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 HACE1Q8IYU2 909 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ARHGAP24Q8N264 748 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 NME8Q8N427 588 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 NAT8LQ8N9F0 302 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MCUQ8NE86 351 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 PRCCQ92733 491 aaPredicted RBP6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ELSPBP1Q96BH3 223 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 RTP4Q96DX8 246 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ZSWIM3Q96MP5 696 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 JMJD8Q96S16 334 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 TARS2Q9BW92 718 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 HEMGNQ9BXL5 484 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 VPS37BQ9H9H4 285 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 RPF1Q9H9Y2 349 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 PLEKHA5Q9HAU0 1116 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 PTPRHQ9HD43 1115 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ACP6Q9NPH0 428 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MKS1Q9NXB0 559 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ERAP1Q9NZ08 941 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 PAK5Q9P286 719 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MCM8Q9UJA3 840 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ACSL6Q9UKU0 697 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 INVSQ9Y283 1065 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 R3HDM2Q9Y2K5 976 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 MTO1Q9Y2Z2 717 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 DERAQ9Y315 318 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 IKBKGQ9Y6K9 419 aa6.59□□□□□ -1.35
ECHDC1-202ENST00000368289 ANKHD1Q8IWZ3 2542 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CLEC18AA5D8T8 446 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 RRN3P2A6NIE6 340 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 C3orf70A6NLC5 250 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CAPN9O14815 690 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CCL16O15467 120 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 SH3BP5O60239 455 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CCDC22O60826 627 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 C6P13671 934 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 PNLIPP16233 465 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 PECAM1P16284 738 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CEBPBP17676 345 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 ENGP17813 658 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CD58P19256 250 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CA4P22748 312 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 PTPN4P29074 926 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 ELF1P32519 619 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 GCKP35557 465 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 NR2C2P49116 596 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 SERPINB9P50453 376 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 CDK16Q00536 496 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 SLC25A11Q02978 314 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 SLC18A2Q05940 514 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 LAMTOR4Q0VGL1 99 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 PDIA2Q13087 525 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 NAB1Q13506 487 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 KRT72Q14CN4 511 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 TMED2Q15363 201 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 WDR72Q3MJ13 1102 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 FAM78AQ5JUQ0 283 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 ATF7IP2Q5U623 682 aa6.58□□□□□ -1.36
ECHDC1-202ENST00000368289 PMS2CLQ68D20 193 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms