RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 KLQ9UEF7 1012 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 LIMD1Q9UGP4 676 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 MYBPHLA2RUH7 354 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 MAPK10P53779 464 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 GALNT3Q14435 633 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 INSCQ1MX18 579 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 DCAF12L1Q5VU92 463 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 TRIQKQ629K1 86 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 TDRPQ86YL5 185 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 BHLHE22Q8NFJ8 381 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-204ENST00000368210 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 YIPF2Q9BWQ6 316 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 ZDHHC6Q9H6R6 413 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 CHRAC1Q9NRG0 131 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 ZDHHC18Q9NUE0 388 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 TMCC3Q9ULS5 477 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 AP2A1O95782 977 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 ANXA5P08758 320 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 TPTEP56180 551 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 CLNKQ7Z7G1 428 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 NIPA2Q8N8Q9 360 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 PLEKHO2Q8TD55 490 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 ACBD6Q9BR61 282 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 ATP13A3Q9H7F0 1226 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 ZNF232Q9UNY5 417 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 WBP11Q9Y2W2 641 aaKnown RBP13.29□□□□□ -0.28
PTPRK-204ENST00000368210 NOS1APO75052 506 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-204ENST00000368210 COQ9O75208 318 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 MLYCDO95822 493 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 L1CAMP32004 1257 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 S100A3P33764 101 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 FBXW4P57775 412 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 ARHGAP1Q07960 439 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 SQLEQ14534 574 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 CCSAPQ6IQ19 270 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-204ENST00000368210 CAMK1DQ8IU85 385 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 HJURPQ8NCD3 748 aaPredicted RBP13.29□□□□□ -0.28
PTPRK-204ENST00000368210 OR4L1Q8NH43 312 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 HPS4Q9NQG7 708 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 PACSIN3Q9UKS6 424 aa13.29□□□□□ -0.28
PTPRK-204ENST00000368210 TRAV19A0A0A6YYK7 116 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 NDUFV1P49821 464 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 HK2P52789 917 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 GDF10P55107 478 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 SMU1Q2TAY7 513 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 BROXQ5VW32 411 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 AMER2Q8N7J2 671 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 RP9Q8TA86 221 aaKnown RBP13.28□□□□□ -0.28
PTPRK-204ENST00000368210 C12orf65Q9H3J6 166 aaKnown RBP13.28□□□□□ -0.28
PTPRK-204ENST00000368210 TRPV5Q9NQA5 729 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 AHSPQ9NZD4 102 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 ATP6AP2A0A1C7CYW4 349 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 CD3EAPO15446 510 aaKnown RBP13.28□□□□□ -0.28
PTPRK-204ENST00000368210 ATP6AP2O75787 350 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 CATP04040 527 aaKnown RBP13.28□□□□□ -0.28
PTPRK-204ENST00000368210 PURAQ00577 322 aaKnown RBP13.28□□□□□ -0.28
PTPRK-204ENST00000368210 ACSM2AQ08AH3 577 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 SMARCB1Q12824 385 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 TARBP2Q15633 366 aaKnown RBP13.28□□□□□ -0.28
PTPRK-204ENST00000368210 KCNA10Q16322 511 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 ACSM2BQ68CK6 577 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 ZNF567Q8N184 647 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 PROX1Q92786 737 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 BTBD9Q96Q07 612 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 AGO3Q9H9G7 860 aaKnown RBP13.28□□□□□ -0.28
PTPRK-204ENST00000368210 GMIPQ9P107 970 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 HMGXB4Q9UGU5 601 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 PADI4Q9UM07 663 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 PCDHB9Q9Y5E1 797 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 PRR5-ARHGAP8B1AHC4 643 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 DAOAP59103 153 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 PSME3P61289 254 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 ARHGAP8P85298 464 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 SH3PXD2AQ5TCZ1 1133 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 STK32CQ86UX6 486 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 ECHDC2Q86YB7 292 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 CFAP52Q8N1V2 620 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 SFRP1Q8N474 314 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 SMYD1Q8NB12 490 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 MINDY3Q9H8M7 445 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 KLHL3Q9UH77 587 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 GNPTGQ9UJJ9 305 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 CCNCP24863 283 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 RRM2P31350 389 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 ATP6V0D1P61421 351 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 SATL1Q86VE3 508 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 SLC35B2Q8TB61 432 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 NARS2Q96I59 477 aaKnown RBP13.28□□□□□ -0.28
PTPRK-204ENST00000368210 NMUR2Q9GZQ4 415 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 CDH19Q9H159 772 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 GBA3Q9H227 469 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 ARHGEF3Q9NR81 526 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 TMPRSS4Q9NRS4 437 aa13.28□□□□□ -0.28
PTPRK-204ENST00000368210 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.27□□□□□ -0.28
PTPRK-204ENST00000368210 CCDC162PA2VCL2 907 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 ARL5CA6NH57 179 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 CFHP08603 1231 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 CREB1P16220 341 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 CES1P23141 567 aa13.27□□□□□ -0.28
PTPRK-204ENST00000368210 WARSP23381 471 aaKnown RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms