RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 PBX3P40426 434 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CCR4P51679 360 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 FASTKD3Q14CZ7 662 aaKnown RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 TBC1D3GQ6DHY5 549 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 TBC1D3CQ6IPX1 549 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 ZNF544Q6NX49 715 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 TBC1D3Q8IZP1 549 aaPredicted RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 FBXO22Q8NEZ5 403 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CLP1Q92989 425 aaKnown RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CDH19Q9H159 772 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 AKAP7Q9P0M2 348 aaPredicted RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 ZFP37Q9Y6Q3 630 aaPredicted RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 UBXN8O00124 270 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 TNFAIP8O95379 198 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 PAICSP22234 425 aaKnown RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CRHR1P34998 444 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 RABGGTBP53611 331 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CERS6Q6ZMG9 384 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CUZD1Q86UP6 607 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 RASAL3Q86YV0 1011 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 RAVER1Q8IY67 606 aaKnown RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 ARL14EPQ8N8R7 260 aaPredicted RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 PCDH19Q8TAB3 1148 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 FBXW11Q9UKB1 542 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 SLC27A6Q9Y2P4 619 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CAB39Q9Y376 341 aaPredicted RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CDK14O94921 469 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 ZNF549Q6P9A3 640 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 FAM124AQ86V42 546 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 ECHDC2Q86YB7 292 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 RCN3Q96D15 328 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 ACAT2Q9BWD1 397 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 TPRKBQ9Y3C4 175 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 A0A1W2PQ67 120 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 TRAFD1O14545 582 aaPredicted RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 HNRNPDQ14103 355 aaKnown RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CHST9Q7L1S5 443 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 CPA6Q8N4T0 437 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 SCLYQ96I15 445 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 ZNF184Q99676 751 aaPredicted RBP16.53■□□□□ 0.24
SCAF8-201ENST00000367178 C15orf41Q9Y2V0 281 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 SLC45A1Q9Y2W3 748 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 PCDHGC4Q9Y5F7 938 aa16.53■□□□□ 0.24
SCAF8-201ENST00000367178 APODP05090 189 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 ATAT1Q5SQI0 421 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 SVOPQ8N4V2 548 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 CAMKK1Q8N5S9 505 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 HMCESQ96FZ2 354 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 KCTD5Q9NXV2 234 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 AJAP1Q9UKB5 411 aaPredicted RBP16.52■□□□□ 0.24
SCAF8-201ENST00000367178 MYRFQ9Y2G1 1151 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 H0Y858 1186 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 IDO1P14902 403 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 ALYREFQ86V81 257 aaKnown RBP16.52■□□□□ 0.24
SCAF8-201ENST00000367178 CIR1Q86X95 450 aaPredicted RBP16.52■□□□□ 0.24
SCAF8-201ENST00000367178 CAMK1DQ8IU85 385 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 SIAH1Q8IUQ4 282 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 DDHD1Q8NEL9 900 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 NMD3Q96D46 503 aaKnown RBP16.52■□□□□ 0.24
SCAF8-201ENST00000367178 PTCD3Q96EY7 689 aaKnown RBP16.52■□□□□ 0.24
SCAF8-201ENST00000367178 MCRS1Q96EZ8 462 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 ABCG8Q9H221 673 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 MINDY3Q9H8M7 445 aa16.52■□□□□ 0.24
SCAF8-201ENST00000367178 TRIM38O00635 465 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 KELP23276 732 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 NDST2P52849 883 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 NET1Q7Z628 596 aaPredicted RBP16.52■□□□□ 0.23
SCAF8-201ENST00000367178 AADATQ8N5Z0 425 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 FZD10Q9ULW2 581 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 TCAF1Q9Y4C2 921 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 PTGES3LE9PB15 166 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 MT-CYBP00156 380 aaPredicted RBP16.52■□□□□ 0.23
SCAF8-201ENST00000367178 VAV1P15498 845 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 FGFR3P22607 806 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 SPAM1P38567 509 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 TRIM16LQ309B1 348 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 CCDC92Q53HC0 331 aaPredicted RBP16.52■□□□□ 0.23
SCAF8-201ENST00000367178 TAPT1Q6NXT6 567 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 GATAD2AQ86YP4 633 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 CLEC4CQ8WTT0 213 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 C2orf15Q8WU43 125 aaKnown RBP16.52■□□□□ 0.23
SCAF8-201ENST00000367178 FERD3LQ96RJ6 166 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 HMGXB4Q9UGU5 601 aa16.52■□□□□ 0.23
SCAF8-201ENST00000367178 COL1A1P02452 1464 aaPredicted RBP16.52■□□□□ 0.23
SCAF8-201ENST00000367178 PTPRJQ12913 1337 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 LTBP3Q9NS15 1303 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 URADA6NGE7 173 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 UNCXA6NJT0 531 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 SLC38A8A6NNN8 435 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 IFNA16P05015 189 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 UMPSP11172 480 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 ATXN1P54253 815 aaKnown RBP16.51■□□□□ 0.23
SCAF8-201ENST00000367178 KCNJ2P63252 427 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 AP5B1Q2VPB7 878 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 ZNF618Q5T7W0 954 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 BHLHB9Q6PI77 547 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 COPG2Q9UBF2 871 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 RPS6KA6Q9UK32 745 aa16.51■□□□□ 0.23
SCAF8-201ENST00000367178 ZNF232Q9UNY5 417 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms