RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 PRDM16Q9HAZ2 1276 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 WDR6Q9NNW5 1121 aaKnown RBP19.68■□□□□ 0.74
TRIM58-201ENST00000366481 UTP6Q9NYH9 597 aaKnown RBP19.68■□□□□ 0.74
TRIM58-201ENST00000366481 SHROOM3Q8TF72 1996 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 CCL15-CCL14A0A0B4J2E2 113 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 TTC24A2A3L6 582 aaPredicted RBP19.68■□□□□ 0.74
TRIM58-201ENST00000366481 ZNF701M0R085 212 aaPredicted RBP19.68■□□□□ 0.74
TRIM58-201ENST00000366481 SNAP91O60641 907 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 HSPA1AP0DMV8 641 aaKnown RBP19.68■□□□□ 0.74
TRIM58-201ENST00000366481 HSPA1BP0DMV9 641 aaKnown RBP19.68■□□□□ 0.74
TRIM58-201ENST00000366481 GABRB3P28472 473 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 RCVRNP35243 200 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 CACNB2Q08289 660 aaPredicted RBP19.68■□□□□ 0.74
TRIM58-201ENST00000366481 CCL15Q16663 113 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 SEPT8Q92599 483 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 VTA1Q9NP79 307 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 IFT80Q9P2H3 777 aaPredicted RBP19.68■□□□□ 0.74
TRIM58-201ENST00000366481 CDH7Q9ULB5 785 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 SLC27A5Q9Y2P5 690 aa19.68■□□□□ 0.74
TRIM58-201ENST00000366481 MTF2Q9Y483 593 aaPredicted RBP19.68■□□□□ 0.74
TRIM58-201ENST00000366481 CD4P01730 458 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 MYL3P08590 195 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 MYF6P23409 242 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 DCKP27707 260 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 GJA9P57773 515 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 FUT11Q495W5 492 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 ESRP1Q6NXG1 681 aaKnown RBP19.67■□□□□ 0.74
TRIM58-201ENST00000366481 TRUB1Q8WWH5 349 aaKnown RBP19.67■□□□□ 0.74
TRIM58-201ENST00000366481 EXT2Q93063 718 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 ZNF419Q96HQ0 510 aaPredicted RBP19.67■□□□□ 0.74
TRIM58-201ENST00000366481 SLC25A23Q9BV35 468 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 WDCPQ9H6R7 721 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 TMA7Q9Y2S6 64 aaKnown RBP19.67■□□□□ 0.74
TRIM58-201ENST00000366481 PTGESO14684 152 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 CLPXO76031 633 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 ALBP02768 609 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 S100BP04271 92 aaPredicted RBP19.67■□□□□ 0.74
TRIM58-201ENST00000366481 ELK4P28324 431 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 CA8P35219 290 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 DUSP28Q4G0W2 176 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 PIWIL3Q7Z3Z3 882 aaKnown RBP19.67■□□□□ 0.74
TRIM58-201ENST00000366481 BTLAQ7Z6A9 289 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 FAM35AQ86V20 835 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 ZNF354CQ86Y25 554 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 ANKFN1Q8N957 763 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 C3orf58Q8NDZ4 430 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 SENP8Q96LD8 212 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 TRIM15Q9C019 465 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 TTC3P53804 2025 aa19.67■□□□□ 0.74
TRIM58-201ENST00000366481 TCRBV3S1A0A5B6 114 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 MSI1O43347 362 aaKnown RBP19.66■□□□□ 0.74
TRIM58-201ENST00000366481 AHSGP02765 367 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 YWHAQP27348 245 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 CLCNKBP51801 687 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 FAM83EQ2M2I3 478 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 CEP97Q8IW35 865 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 PARP8Q8N3A8 854 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 SMG8Q8ND04 991 aaKnown RBP19.66■□□□□ 0.74
TRIM58-201ENST00000366481 ZMIZ2Q8NF64 920 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 TANKQ92844 425 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 FBRSL1Q9HCM7 1045 aaKnown RBP19.66■□□□□ 0.74
TRIM58-201ENST00000366481 SULT1C4O75897 302 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 SNAP29O95721 258 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 CYP2B6P20813 491 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 TPTEP56180 551 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 LSM3P62310 102 aaKnown RBP19.66■□□□□ 0.74
TRIM58-201ENST00000366481 TRAP1Q12931 704 aaKnown RBP19.66■□□□□ 0.74
TRIM58-201ENST00000366481 SV2CQ496J9 727 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 UBXN11Q5T124 520 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 GPR142Q7Z601 462 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 LDB1Q86U70 411 aaPredicted RBP19.66■□□□□ 0.74
TRIM58-201ENST00000366481 TMEM135Q86UB9 458 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 LSMEM2Q8N112 164 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 KDM1BQ8NB78 822 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 PCYOX1LQ8NBM8 494 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 SCAMP5Q8TAC9 235 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 HDAC10Q969S8 669 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 COLEC11Q9BWP8 271 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 NDFIP2Q9NV92 336 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 BMP2P12643 396 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 OPRL1P41146 370 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 CXCR3P49682 368 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 SLC12A1Q13621 1099 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 STARD8Q92502 1023 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 ELMO2Q96JJ3 720 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 CPA4Q9UI42 421 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 GIT1Q9Y2X7 761 aa19.66■□□□□ 0.74
TRIM58-201ENST00000366481 ALDH2P05091 517 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 SBK3P0C264 359 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 MTHFD1P11586 935 aaKnown RBP19.65■□□□□ 0.74
TRIM58-201ENST00000366481 PABPC1P11940 636 aaKnown RBP19.65■□□□□ 0.74
TRIM58-201ENST00000366481 BDNFP23560 247 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 LRP8Q14114 963 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 CSHL1Q14406 222 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 SQLEQ14534 574 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 PAFAH1B3Q15102 231 aaKnown RBP19.65■□□□□ 0.74
TRIM58-201ENST00000366481 CLEC6AQ6EIG7 209 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 ARMCX6Q7L4S7 300 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 ITPKCQ96DU7 683 aa19.65■□□□□ 0.74
TRIM58-201ENST00000366481 LRCH3Q96II8 777 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms