RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 HUS1BQ8NHY5 278 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 PPM1EQ8WY54 764 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 HTRA1Q92743 480 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 HES6Q96HZ4 224 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 TKTL2Q9H0I9 626 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 PLEKHA4Q9H4M7 779 aa4.06□□□□□ -1.76
RNU6-553P-201ENST00000364047 CCDC196A0A1B0GTZ2 297 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 AKR1B15C9JRZ8 316 aaPredicted RBP4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 LDLRAD4O15165 306 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 SEC14L5O43304 696 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 PLGP00747 810 aaPredicted RBP4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 MAOAP21397 527 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 MCM3P25205 808 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 GNAQP50148 359 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 METAP2P50579 478 aaKnown RBP eCLIP4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 CLCNKAP51800 687 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 FUT6P51993 359 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 SLC20A2Q08357 652 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 BAK1Q16611 211 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 C2orf68Q2NKX9 166 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 KRTAP24-1Q3LI83 254 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 HIST2H2BCQ6DN03 193 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 HIST2H2BDQ6DRA6 164 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 RGMBQ6NW40 437 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 FOXL2NBQ6ZUU3 175 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 SLC46A3Q7Z3Q1 461 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 SMIM29Q86T20 159 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 CHERPQ8IWX8 916 aaKnown RBP4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 LNX1Q8TBB1 728 aaPredicted RBP4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 PABPC5Q96DU9 382 aaKnown RBP4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 RNF125Q96EQ8 232 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 GLIS2Q9BZE0 524 aaPredicted RBP4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 NDST4Q9H3R1 872 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 SDF2L1Q9HCN8 221 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 HINT3Q9NQE9 182 aaKnown RBP4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 MCM9Q9NXL9 1143 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 KCND2Q9NZV8 630 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 ERVK-11Q9UQG0 969 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 SCINQ9Y6U3 715 aa4.05□□□□□ -1.76
RNU6-553P-201ENST00000364047 CGNL1Q0VF96 1302 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 TTC36A6NLP5 189 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 TAF4O00268 1085 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 DDX5P17844 614 aaKnown RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 KCNA5P22460 613 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 ABCD1P33897 745 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 DDIT3P35638 169 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 IL15P40933 162 aaPredicted RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 TMPOP42166 694 aaKnown RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 HNRNPH2P55795 449 aaKnown RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 RELQ04864 619 aaPredicted RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 NAE1Q13564 534 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 SYT16Q17RD7 645 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 OTUD3Q5T2D3 398 aaPredicted RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 FAM69AQ5T7M9 428 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 IRAK1BP1Q5VVH5 260 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 METTL2BQ6P1Q9 378 aaKnown RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 KCTD18Q6PI47 426 aaPredicted RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 MEX3BQ6ZN04 569 aaKnown RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 DCUN1D3Q8IWE4 304 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 SPATA6LQ8N4H0 392 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 KBTBD3Q8NAB2 608 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 MAGEC3Q8TD91 643 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 METTL2AQ96IZ6 378 aaKnown RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 TTC14Q96N46 770 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 SPRY4Q9C004 299 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 KCNN2Q9H2S1 579 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 PPP1R3EQ9H7J1 279 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 PCDH9Q9HC56 1237 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 SARDHQ9UL12 918 aa4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 TTC7AQ9ULT0 858 aaPredicted RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 LRRFIP2Q9Y608 721 aaKnown RBP4.04□□□□□ -1.76
RNU6-553P-201ENST00000364047 GOLGA6L9A6NEM1 432 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 SNAP23O00161 211 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 SEC31AO94979 1220 aaKnown RBP4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 CRYAAP02489 173 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 PYGLP06737 847 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 SP1P08047 785 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 CETPP11597 493 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 XBP1P17861 261 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 TCEA1P23193 301 aaKnown RBP4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 RRM1P23921 792 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 BDKRB2P30411 391 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 NEXNQ0ZGT2 675 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 RBBP5Q15291 538 aaKnown RBP4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 KRT24Q2M2I5 525 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 PRICKLE4Q2TBC4 344 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 KCNT1Q5JUK3 1230 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 SLC9C2Q5TAH2 1124 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 GGNBP1Q5YKI7 109 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 GSG1LQ6UXU4 331 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 QSOX2Q6ZRP7 698 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 SLC9B2Q86UD5 537 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 CADM4Q8NFZ8 388 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 OR2AK2Q8NG84 335 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 SH3GL2Q99962 352 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 FAM110AQ9BQ89 295 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 CSTL1Q9H114 145 aa4.03□□□□□ -1.76
RNU6-553P-201ENST00000364047 SLC25A18Q9H1K4 315 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms