RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 FAR2Q96K12 515 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 TNIP3Q96KP6 325 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 PRICKLE1Q96MT3 831 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 FRG2BQ96QU4 278 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 CGRRF1Q99675 332 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 CLEC7AQ9BXN2 247 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 CCSER1Q9C0I3 900 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 WWTR1Q9GZV5 400 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 XRN2Q9H0D6 950 aaKnown RBP eCLIP-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 AS3MTQ9HBK9 375 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 PRDM11Q9NQV5 511 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 SACM1LQ9NTJ5 587 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 STK32BQ9NY57 414 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 ACSL5Q9ULC5 683 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 NEU3Q9UQ49 428 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 OSGIN2Q9Y236 505 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 UBE2J1Q9Y385 318 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 GTF3C3Q9Y5Q9 886 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 SORL1Q92673 2214 aa-0.18□□□□□ -2.44
RNU6-340P-201ENST00000364005 GIMAP1-GIMAP5A0A087WTJ2 511 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 CYP3A7-CYP3A51PA0A087WV96 503 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 FAM157AC9JC47 383 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 NKX2-8O15522 239 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 PHF1O43189 567 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 ZRANB2O95218 330 aaKnown RBP eCLIP-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 DDAH2O95865 285 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 NGFP01138 241 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 POU2F2P09086 479 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 TCF3P15923 654 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 CYP3A7P24462 503 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 AKAP5P24588 427 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 CORO1AP31146 461 aaKnown RBP-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 ATICP31939 592 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 HNRNPH1P31943 449 aaKnown RBP-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 PMELP40967 661 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 SOX3P41225 446 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 NR2C2P49116 596 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 TAS2R50P59544 299 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 SEC61BP60468 96 aaKnown RBP-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 TLE3Q04726 772 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 KHDRBS1Q07666 443 aaKnown RBP eCLIP-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 FUT7Q11130 342 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 CALCOCO2Q13137 446 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 ITGADQ13349 1161 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 ZNF234Q14588 700 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 ODF1Q14990 250 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 E2F5Q15329 346 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 AAK1Q2M2I8 961 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 SGSM1Q2NKQ1 1148 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 KRTAP6-3Q3LI67 103 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 ARHGEF16Q5VV41 709 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 OR7E24Q6IFN5 339 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 RGMBQ6NW40 437 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 TFAP2EQ6VUC0 442 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 B3GNT6Q6ZMB0 384 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 C17orf53Q8N3J3 647 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 MCPH1Q8NEM0 835 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 PMFBP1Q8TBY8 1022 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 WDR66Q8TBY9 1149 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 KCNG4Q8TDN1 519 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 SGF29Q96ES7 293 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 GIMAP5Q96F15 307 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 CFAP57Q96MR6 1250 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 MPHOSPH8Q99549 860 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 KXD1Q9BQD3 176 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 RTP3Q9BQQ7 232 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 IFT27Q9BW83 186 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 P2RY12Q9H244 342 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 KCNK9Q9NPC2 374 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 TYW1Q9NV66 732 aaKnown RBP-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 FANCLQ9NW38 375 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 POLG2Q9UHN1 485 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 ITGB1BP2Q9UKP3 347 aa-0.19□□□□□ -2.44
RNU6-340P-201ENST00000364005 ASB14A6NK59 587 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 SERPINE3A8MV23 424 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 SHISA9B4DS77 424 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 M0QYT0 321 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 ZNHIT1O43257 154 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 GALR3O60755 368 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 LRCH4O75427 683 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 IGKV4-1P06312 121 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 MYBL2P10244 700 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 GNAZP19086 355 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 MSH3P20585 1137 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 MDKP21741 143 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 SLC7A1P30825 629 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 CLCNKAP51800 687 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 SUMO3P55854 103 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 GSCP56915 257 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 IGLV3-21P80748 117 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 PDE1BQ01064 536 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 MEF2BQ02080 365 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 LRRC63Q05C16 580 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 CD300CQ08708 224 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 ZACNQ401N2 412 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 PPP6R3Q5H9R7 873 aaPredicted RBP-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 C3orf38Q5JPI3 329 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 WLSQ5T9L3 541 aa-0.2□□□□□ -2.44
RNU6-340P-201ENST00000364005 SOGA3Q5TF21 947 aa-0.2□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms