RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 VPS9D1Q9Y2B5 631 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 H3BNX3 289 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 SLC22A3O75751 556 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 BNIP2Q12982 314 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 DGUOKQ16854 277 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 CCDC142Q17RM4 750 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 CRTC3Q6UUV7 619 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 ANKLE1Q8NAG6 615 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 DRAXINQ8NBI3 349 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-201ENST00000361866 HTRA1Q92743 480 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 B3GALT6Q96L58 329 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 TEKT5Q96M29 485 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 CNOT6Q9ULM6 557 aaKnown RBP13.92□□□□□ -0.18
COL6A1-201ENST00000361866 SQORQ9Y6N5 450 aa13.92□□□□□ -0.18
COL6A1-201ENST00000361866 MAGEB3O15480 346 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 KCNH1O95259 989 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 DHRS4L1P0CG22 281 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 HALP42357 657 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 STX19Q8N4C7 294 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 CPSF7Q8N684 471 aaKnown RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 FCRL3Q96P31 734 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 SH3GL1Q99961 368 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 KATNAL1Q9BW62 490 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 POLR1EQ9GZS1 481 aaKnown RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 RASSF1Q9NS23 344 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 RCOR3Q9P2K3 495 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 SNX8Q9Y5X2 465 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 TMEM247A6NEH6 219 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 ARHGEF9O43307 516 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 GSNP06396 782 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 STT3AP46977 705 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 LSAMPQ13449 338 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 RBM20Q5T481 1227 aaKnown RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 FAM45BPQ6NSW5 357 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 FAM45AQ8TCE6 357 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 SEPT8Q92599 483 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 PDGFDQ9GZP0 370 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 EPB41L1Q9H4G0 881 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 ATP13A1Q9HD20 1204 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 IGSF9Q9P2J2 1179 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 LILRA4P59901 499 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 DSC2Q02487 901 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 ENPEPQ07075 957 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 STXBP5Q5T5C0 1151 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 UGT3A1Q6NUS8 523 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 SLCO6A1Q86UG4 719 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 ZC3HC1Q86WB0 502 aaKnown RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 LGI2Q8N0V4 545 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 ZNF540Q8NDQ6 660 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 ASB9Q96DX5 294 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 CENPNQ96H22 339 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 SERPINB11Q96P15 392 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 HOPXQ9BPY8 73 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 C3orf18Q9UK00 162 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 FTH1P02794 183 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 COL6A2P12110 1019 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 ICAM3P32942 547 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 GGT5P36269 586 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 CSTF3Q12996 717 aaKnown RBP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 CPSF6Q16630 551 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL6A1-201ENST00000361866 CTXN3Q4LDR2 81 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 SLC35F5Q8WV83 523 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 COX4I2Q96KJ9 171 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 BCO2Q9BYV7 579 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 ZC4H2Q9NQZ6 224 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 SH3BP4Q9P0V3 963 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 TPRKBQ9Y3C4 175 aa13.91□□□□□ -0.18
COL6A1-201ENST00000361866 CD3EAPO15446 510 aaKnown RBP13.9□□□□□ -0.18
COL6A1-201ENST00000361866 LRATO95237 230 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 OR4Q2P0C623 313 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 IDO1P14902 403 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 SLC7A1P30825 629 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 MERTKQ12866 999 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 FSCN1Q16658 493 aaKnown RBP13.9□□□□□ -0.18
COL6A1-201ENST00000361866 CTC1Q2NKJ3 1217 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 NAPRTQ6XQN6 538 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 TBC1D21Q8IYX1 336 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 ASB2Q96Q27 587 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 ZBTB26Q9HCK0 441 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 VPS28Q9UK41 221 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 COQ6Q9Y2Z9 468 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 SERPIND1P05546 499 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 MSH3P20585 1137 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 UGT1A1P22309 533 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 UGT1A4P22310 534 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 ADSLP30566 484 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-201ENST00000361866 CDH5P33151 784 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-201ENST00000361866 UGT1A3P35503 534 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 UGT1A5P35504 534 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 RRM2BQ7LG56 351 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 VPS37AQ8NEZ2 397 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 DQX1Q8TE96 717 aaKnown RBP13.9□□□□□ -0.18
COL6A1-201ENST00000361866 ABHD8Q96I13 439 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 FBXL20Q96IG2 436 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 CHID1Q9BWS9 393 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 VTA1Q9NP79 307 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 USE1Q9NZ43 259 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 TCAF1Q9Y4C2 921 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 CACNA1SQ13698 1873 aa13.9□□□□□ -0.18
COL6A1-201ENST00000361866 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms