RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 ZNF8P17098 575 aaPredicted RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZNF132P52740 706 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 SUZ12Q15022 739 aaKnown RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 PANX1Q96RD7 426 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 POLMQ9NP87 494 aaPredicted RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 INTS7Q9NVH2 962 aaKnown RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 PSMD9O00233 223 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 AP5Z1O43299 807 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 RPL14P50914 215 aaKnown RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 WNT3AP56704 352 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 MRPS22P82650 360 aaKnown RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 PYDC1Q8WXC3 89 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 EXOSC8Q96B26 276 aaKnown RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 FAM237BA0A1B0GVD1 139 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 LDLRP01130 860 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 SNX30Q5VWJ9 437 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZNF398Q8TD17 642 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 UBASH3BQ8TF42 649 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 SAP18O00422 153 aaKnown RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 EPHB6O15197 1021 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 HYAL2Q12891 473 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 TRIQKQ629K1 86 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 KIFC1Q9BW19 673 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 TBC1D14Q9P2M4 693 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 CLEC4AQ9UMR7 237 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 CHADO15335 359 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ATG13O75143 517 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 LNX2Q8N448 690 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 MAGEE2Q8TD90 523 aaPredicted RBP20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 AP2M1Q96CW1 435 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 TEKT5Q96M29 485 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 RHBDL2Q9NX52 303 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 COLEC10Q9Y6Z7 277 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 FSHRP23945 695 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 C17orf64Q86WR6 236 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 TSTD1Q8NFU3 115 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 TRNT1Q96Q11 434 aaKnown RBP20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 COL20A1Q9P218 1284 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZBTB22O15209 634 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 TIPRLO75663 272 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 KELP23276 732 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 DGKGP49619 791 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 STXBP1P61764 594 aaKnown RBP20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 FRG1Q14331 258 aaKnown RBP20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZCWPW2Q504Y3 356 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 RBFAQ8N0V3 343 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 MYLK2Q9H1R3 596 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 WNT7AO00755 349 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 OR1F1O43749 312 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 GNSP15586 552 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 MAPKAPK3Q16644 382 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 KLHL17Q6TDP4 642 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ENPP7Q6UWV6 458 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 TMC3Q7Z5M5 1100 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 KAT2AQ92830 837 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 BTN2A3PQ96KV6 586 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 OR10H3O60404 316 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 FAM155BO75949 473 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 MAPK8P45983 427 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 HSPA13P48723 471 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ITIH4Q14624 930 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 CDC73Q6P1J9 531 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 KLHL35Q6PF15 583 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 CLEC17AQ6ZS10 378 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 DNASE1L2Q92874 299 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 PPCDCQ96CD2 204 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 FGFBP2Q9BYJ0 223 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ARHGEF4Q9NR80 690 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 MORF4L1Q9UBU8 362 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZNF490Q9ULM2 529 aaPredicted RBP20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 GATMP50440 423 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ARF5P84085 180 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 TRIM16LQ309B1 348 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 INTS6LQ5JSJ4 861 aaKnown RBP20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 CCNYL2Q5T2Q4 361 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 SLC51AQ86UW1 340 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZCCHC9Q8N567 271 aaKnown RBP20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 FNDC11Q9BVV2 318 aa20.29■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZMYM2Q9UBW7 1377 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 GPR25O00155 361 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 GNB5O14775 395 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 TPST2O60704 377 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 SPPL2BQ8TCT7 592 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 PNO1Q9NRX1 252 aaKnown RBP20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 ERVK-11Q9UQG0 969 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 SLC28A1O00337 649 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 TPD52L2O43399 206 aaKnown RBP20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 SRP54P61011 504 aaKnown RBP20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 SLC25A52Q3SY17 297 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 C10orf107Q8IVU9 208 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 TRIM24O15164 1050 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 GRIA3P42263 894 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 MAPKAPK2P49137 400 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 MIEF2Q96C03 454 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 EBPLQ9BY08 206 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 CFAP20Q9Y6A4 193 aaKnown RBP20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 CYP3A7-CYP3A51PA0A087WV96 503 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 CYP3A7P24462 503 aa20.28■□□□□ 0.84
CDC42BPB-201ENST00000361246 CNGB3Q9NQW8 809 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms