RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PEPDP12955 493 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 LIPEQ05469 1076 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 OGFRL1Q5TC84 451 aaPredicted RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 FAM91A1Q658Y4 838 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ADNP2Q6IQ32 1131 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 SYNE4Q8N205 404 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 MAFIPQ8WZ33 124 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 SGCDQ92629 289 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 FADS3Q9Y5Q0 445 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 IGFBP5P24593 272 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 ABRQ12979 859 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 TAF1CQ15572 869 aaPredicted RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 FAM76BQ5HYJ3 339 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 SLC25A25Q6KCM7 469 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 IL1RAPQ9NPH3 570 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 NINJ2Q9NZG7 142 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 IRF8Q02556 426 aa9.31□□□□□ -0.92
VPS13A-203ENST00000360280 CWF19L1Q69YN2 538 aaKnown RBP9.31□□□□□ -0.92
VPS13A-203ENST00000360280 FADS2P1A8MWK0 482 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 CHRNA5P30532 468 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 FBXL19Q6PCT2 694 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 BEND5Q7L4P6 421 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 RAB2BQ8WUD1 216 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 TATDN2Q93075 761 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 CLDN25C9JDP6 229 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SLC28A2O43868 658 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 CLPXO76031 633 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 PCSK2P16519 638 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF268Q14587 947 aaPredicted RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ATP13A1Q9HD20 1204 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ADGRE2Q9UHX3 823 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 PCDHB12Q9Y5F1 795 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 PNPLA6Q8IY17 1366 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 PRAMEF22A3QJZ6 481 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 GCNT1Q02742 428 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ALG10Q5BKT4 473 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SMPD3Q9NY59 655 aaPredicted RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 EIF3KQ9UBQ5 218 aaKnown RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 TRPS1Q9UHF7 1281 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SH3BGRLO75368 114 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 HGFP14210 728 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 GALK1P51570 392 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SNAPC1Q16533 368 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 S100PBPQ96BU1 408 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 CNPPD1Q9BV87 410 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 NEXMIFQ5QGS0 1516 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 CCNDBP1O95273 360 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 FGBP02675 491 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ICAM1P05362 532 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 CTSEP14091 401 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 CCSER2Q9H7U1 834 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 RCOR3Q9P2K3 495 aaPredicted RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 RGS17Q9UGC6 210 aaPredicted RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 RPL6Q02878 288 aaKnown RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 TAPT1Q6NXT6 567 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ZNF571Q7Z3V5 609 aaPredicted RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 PDCD5O14737 125 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 CYP11B2P19099 503 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 PCDH19Q8TAB3 1148 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 AIREO43918 545 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SNX3O60493 162 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 CD2P06729 351 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ERP29P30040 261 aaKnown RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 RPL22P35268 128 aaKnown RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 TUBP50607 506 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 FAAH2Q6GMR7 532 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SPERTQ8NA61 448 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 MADDQ8WXG6 1647 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 A0A0A0MRY4 1105 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 MANFP55145 182 aaKnown RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 FAAP100Q0VG06 881 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 MFSD10Q14728 455 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ADCY4Q8NFM4 1077 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 EZH1Q92800 747 aaPredicted RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ZDHHC15Q96MV8 337 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SPATA13Q96N96 652 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ETNK2Q9NVF9 386 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ABCA6Q8N139 1617 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SLC22A3O75751 556 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 MARSP56192 900 aaKnown RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 TSPAN5P62079 268 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 HERC3Q15034 1050 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 LACTB2Q53H82 288 aaPredicted RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 AADACL4Q5VUY2 407 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SRCP12931 536 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 PVALBP20472 110 aaPredicted RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ARCN1P48444 511 aaKnown RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SDR16C5Q8N3Y7 309 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 GPRC5AQ8NFJ5 357 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 SLC22A4Q9H015 551 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 FAM205CA6NFA0 338 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 PAEPP09466 180 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 TIE1P35590 1138 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 MECP2P51608 486 aaKnown RBP9.3□□□□□ -0.92
VPS13A-203ENST00000360280 ITGA7Q13683 1181 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 C3orf14Q9HBI5 128 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 WDR37Q9Y2I8 494 aa9.3□□□□□ -0.92
VPS13A-203ENST00000360280 FAM189A2Q15884 450 aa9.29□□□□□ -0.92
VPS13A-203ENST00000360280 SWT1Q5T5J6 900 aaKnown RBP9.29□□□□□ -0.92
VPS13A-203ENST00000360280 PRAMEF17Q5VTA0 474 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms