RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 PRG2P13727 222 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 HTR1BP28222 390 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 RCVRNP35243 200 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 NDRG1Q92597 394 aaKnown RBP16.34■□□□□ 0.21
LMBR1-202ENST00000359422 NELL1Q92832 810 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 TTPALQ9BTX7 342 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 C5orf60A6NFR6 353 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 CILPO75339 1184 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 OR4Q2P0C623 313 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 FLT3LGP49771 235 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 CYP4F2P78329 520 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 CYP4F3Q08477 520 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 NDUFAF6Q330K2 333 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 DEPDC4Q8N2C3 294 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 RASGEF1CQ8N431 466 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 PPTC7Q8NI37 304 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 BSNDQ8WZ55 320 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 NPAS2Q99743 824 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 NMUR2Q9GZQ4 415 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 CHRAC1Q9NRG0 131 aa16.34■□□□□ 0.21
LMBR1-202ENST00000359422 CNTRLQ7Z7A1 2325 aa16.33■□□□□ 0.21
LMBR1-202ENST00000359422 WARSP23381 471 aaKnown RBP16.33■□□□□ 0.21
LMBR1-202ENST00000359422 RPL4P36578 427 aaKnown RBP16.33■□□□□ 0.21
LMBR1-202ENST00000359422 OTOP3Q7RTS5 596 aa16.33■□□□□ 0.21
LMBR1-202ENST00000359422 CLP1Q92989 425 aaKnown RBP16.33■□□□□ 0.21
LMBR1-202ENST00000359422 BTN2A3PQ96KV6 586 aa16.33■□□□□ 0.21
LMBR1-202ENST00000359422 SLC38A2Q96QD8 506 aa16.33■□□□□ 0.21
LMBR1-202ENST00000359422 CRISPLD1Q9H336 500 aa16.33■□□□□ 0.21
LMBR1-202ENST00000359422 PTGFRNQ9P2B2 879 aa16.33■□□□□ 0.21
LMBR1-202ENST00000359422 PLLPQ9Y342 182 aa16.33■□□□□ 0.21
LMBR1-202ENST00000359422 ACSL4O60488 711 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 CXCR3P49682 368 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 SPIRE1Q08AE8 756 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 TRIM32Q13049 653 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 CCNIQ14094 377 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 TAF13Q15543 124 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 Q96MT0 163 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 SMIM35A0A1B0GVV1 85 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 CLDN11O75508 207 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 ELFN1P0C7U0 828 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 PKMP14618 531 aaKnown RBP16.33■□□□□ 0.2
LMBR1-202ENST00000359422 MPSTP25325 297 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 RGMBQ6NW40 437 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 PARGQ86W56 976 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 XYLT1Q86Y38 959 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 TMEM199Q8N511 208 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 KLHL23Q8NBE8 558 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 NKD2Q969F2 451 aaPredicted RBP16.33■□□□□ 0.2
LMBR1-202ENST00000359422 ARL8BQ9NVJ2 186 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 AKAP7Q9P0M2 348 aaPredicted RBP16.33■□□□□ 0.2
LMBR1-202ENST00000359422 DERAQ9Y315 318 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 AP4B1Q9Y6B7 739 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 ARHGAP23Q9P227 1491 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 AP3D1O14617 1153 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 MDM4O15151 490 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 DDX3YO15523 660 aaKnown RBP16.33■□□□□ 0.2
LMBR1-202ENST00000359422 SERPINB7O75635 380 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 FAM155BO75949 473 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 PPM1AP35813 382 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 CRTC3Q6UUV7 619 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 ARHGAP22Q7Z5H3 698 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 R3HCC1LQ7Z5L2 792 aaKnown RBP16.33■□□□□ 0.2
LMBR1-202ENST00000359422 NAT16Q8N8M0 369 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 MAB21L3Q8N8X9 362 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 AASDHPPTQ9NRN7 309 aa16.33■□□□□ 0.2
LMBR1-202ENST00000359422 SPATA31D3P0C874 917 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 SNHG28P0DPA3 235 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 NELFEP18615 380 aaKnown RBP16.32■□□□□ 0.2
LMBR1-202ENST00000359422 SLC6A2P23975 617 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 KLF10Q13118 480 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 PERM1Q5SV97 790 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 SPATA31D4Q6ZUB0 917 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 ANKS1BQ7Z6G8 1248 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 CLNKQ7Z7G1 428 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 TMEM139Q8IV31 216 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 C1orf127Q8N9H9 656 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 OR2T12Q8NG77 320 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 MYDGFQ969H8 173 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 ZHX1-C8orf76Q96EF9 292 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 RPL26L1Q9UNX3 145 aaKnown RBP16.32■□□□□ 0.2
LMBR1-202ENST00000359422 CORO2BQ9UQ03 480 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 U3KQV3 271 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 A0A1W2PQH9 124 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 NOL4O94818 638 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 C1RP00736 705 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 SLC1A5Q15758 541 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 QPCTQ16769 361 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 FAM46CQ5VWP2 391 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 RHBDF2Q6PJF5 856 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 VSTM1Q6UX27 236 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 CPT1BQ92523 772 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 OMA1Q96E52 524 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 ITCHQ96J02 903 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 QKIQ96PU8 341 aaKnown RBP eCLIP16.32■□□□□ 0.22e-19■■■■■ 50.9
LMBR1-202ENST00000359422 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 VPS4AQ9UN37 437 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 DISP2A7MBM2 1401 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 MAP1BP46821 2468 aaKnown RBP16.32■□□□□ 0.2
LMBR1-202ENST00000359422 MFSD11O43934 449 aa16.32■□□□□ 0.2
LMBR1-202ENST00000359422 KLHL18O94889 574 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms