RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ZNF140P52738 457 aaPredicted RBP13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 ACVR1Q04771 509 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 DNAJC3Q13217 504 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 E2F5Q15329 346 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 CNGA3Q16281 694 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 TUBB8Q3ZCM7 444 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 FNDC3BQ53EP0 1204 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 DPY19L3Q6ZPD9 716 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 STRA8Q7Z7C7 330 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 LMNTD2Q8IXW0 634 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 PHTF2Q8N3S3 785 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 KDM1BQ8NB78 822 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 OR13J1Q8NGT2 312 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 FRS2Q8WU20 508 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 PIH1D2Q8WWB5 315 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 SORCS1Q8WY21 1168 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 DNAJC1Q96KC8 554 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 HEPHQ9BQS7 1158 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 SUV39H2Q9H5I1 410 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 SSU72Q9NP77 194 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 KCNK9Q9NPC2 374 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 LIMD1Q9UGP4 676 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 SMG5Q9UPR3 1016 aaKnown RBP13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 ZNF711Q9Y462 761 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 ARL5AQ9Y689 179 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 SPTBN2O15020 2390 aa13.88□□□□□ -0.19
PDLIM5-203ENST00000359265 A0A1W2PPM1 405 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 TMEM120BA0PK00 339 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 TTC34A8MYJ7 566 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 FOXO6A8MYZ6 492 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 APODP05090 189 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 ITGA2BP08514 1039 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 GKP32189 559 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 LIMK2P53671 638 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 PFKPQ01813 784 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 BMPR2Q13873 1038 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 PTPRNQ16849 979 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 ZNF470Q6ECI4 717 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 NEPROQ6NW34 567 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 TIFABQ6ZNK6 161 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 KIAA0408Q6ZU52 694 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 OTUD6BQ8N6M0 293 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 OR2A12Q8NGT7 310 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 TTC8Q8TAM2 541 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 SPOCK2Q92563 424 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 PTPRN2Q92932 1015 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 ECHDC3Q96DC8 303 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 LRIG1Q96JA1 1093 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 AGAP2Q99490 1192 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 MFSD1Q9H3U5 465 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 MAGEE1Q9HCI5 957 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 NLE1Q9NVX2 485 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 POLR3BQ9NW08 1133 aaPredicted RBP13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 NKIRAS1Q9NYS0 192 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 GGT7Q9UJ14 662 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 PHTF1Q9UMS5 762 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 PLA2G4CQ9UP65 541 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 KCTD3Q9Y597 815 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 PSAT1Q9Y617 370 aa13.87□□□□□ -0.19
PDLIM5-203ENST00000359265 CKAP5Q14008 2032 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 A0A0J9YYE9 177 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 EDDM13A0A1B0GTR0 161 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 CAPN8A6NHC0 703 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 FAM47DPA6NHR8 397 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 PRRT4C9JH25 899 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 GOLGA8TH3BQL2 631 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 STX7O15400 261 aaKnown RBP13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 PRPF4O43172 522 aaKnown RBP eCLIP13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 TRBC1P01850 177 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 SLC4A1P02730 911 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 UGT2B4P06133 528 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 CREB1P16220 341 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 CTPS1P17812 591 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 KRT4P19013 534 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 PSMA3P25788 255 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 NFKBIAP25963 317 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 SLC8A1P32418 973 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 MDH1P40925 334 aaKnown RBP13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 HADHAP40939 763 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 ABL2P42684 1182 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 SLC1A2P43004 574 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 GABPB1Q06547 395 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 ILF2Q12905 390 aaKnown RBP13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 MROH9Q5TGP6 573 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 AFTPHQ6ULP2 937 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 GDPD4Q6W3E5 623 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 USP45Q70EL2 814 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 C4orf33Q8N1A6 199 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 SLC44A3Q8N4M1 653 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 TTC30BQ8N4P2 665 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 CHST14Q8NCH0 376 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 C2CD4AQ8NCU7 369 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 MDGA1Q8NFP4 955 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 OR6P1Q8NGX9 317 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 GRIN3AQ8TCU5 1115 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 ACMSDQ8TDX5 336 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 HDAC10Q969S8 669 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 MSANTD3Q96H12 275 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 OSBPL1AQ9BXW6 950 aa13.86□□□□□ -0.19
PDLIM5-203ENST00000359265 CAPS2Q9BXY5 557 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms