RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SLC6A15Q9H2J7 730 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 RIPK2O43353 540 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 DGKAP23743 735 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 HSD11B1P28845 292 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 SLC7A1P30825 629 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 SLC1A6P48664 564 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 NFATC2Q13469 925 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 PGM2L1Q6PCE3 622 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 SMARCD3Q6STE5 483 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 FIP1L1Q6UN15 594 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 KCNMB4Q86W47 210 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 PHF10Q8WUB8 498 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 ASB12Q8WXK4 309 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 MYLPFQ96A32 169 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 TMEM121Q9BTD3 319 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 ASPNQ9BXN1 380 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 CHIAQ9BZP6 476 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 KLHL4Q9C0H6 718 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 LRRC72A6NJI9 287 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 CSTBP04080 98 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 EPHX1P07099 455 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 RIDAP52758 137 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 RPP38P78345 283 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 RUNX2Q13950 521 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 FSCN1Q16658 493 aaKnown RBP9.78□□□□□ -0.84
CHD3-202ENST00000358181 ZMIZ2Q8NF64 920 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 KAT5Q92993 513 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 PLCL2Q9UPR0 1127 aa9.78□□□□□ -0.84
CHD3-202ENST00000358181 FKTNO75072 461 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 ZNF823P16415 610 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 GNB3P16520 340 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 MLLT3P42568 568 aaPredicted RBP9.77□□□□□ -0.84
CHD3-202ENST00000358181 RXRGP48443 463 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 USP46P62068 366 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 PRKCDQ05655 676 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 PPP3CAQ08209 521 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 ZCWPW2Q504Y3 356 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 ZNF484Q5JVG2 852 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 HECTD2Q5U5R9 776 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 LINGO1Q96FE5 620 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 SMARCD1Q96GM5 515 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 MRGBPQ9NV56 204 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 DDX18Q9NVP1 670 aaKnown RBP9.77□□□□□ -0.84
CHD3-202ENST00000358181 MRPS33Q9Y291 106 aaKnown RBP9.77□□□□□ -0.84
CHD3-202ENST00000358181 BTRCQ9Y297 605 aa9.77□□□□□ -0.84
CHD3-202ENST00000358181 ZNF726A6NNF4 738 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ZNF20P17024 532 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 FUT4P22083 530 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 IL12AP29459 219 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ABCG1P45844 678 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 PSME3P61289 254 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 GRIK2Q13002 908 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 PFKFB4Q16877 469 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 HHIPL2Q6UWX4 724 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 EFHD2Q96C19 240 aaPredicted RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 COX4I2Q96KJ9 171 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ZNF224Q9NZL3 707 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 RSL24D1Q9UHA3 163 aaKnown RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 COLEC10Q9Y6Z7 277 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ADGRB3O60242 1522 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ZNF878C9JN71 531 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 PDXKO00764 312 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 JMJD7P0C870 316 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 MMP13P45452 471 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ATP13A5Q4VNC0 1218 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 GPR158Q5T848 1215 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ADNP2Q6IQ32 1131 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 WDR59Q6PJI9 974 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 UBE2Q1Q7Z7E8 422 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 TKTL2Q9H0I9 626 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 TBX20Q9UMR3 447 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 TPRKBQ9Y3C4 175 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 CAMSAP1Q5T5Y3 1602 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 C5orf51A6NDU8 294 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 PEX12O00623 359 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 HMGCRP04035 888 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 RGS19P49795 217 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ELAVL2Q12926 359 aaKnown RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 MED22Q15528 200 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 STYK1Q6J9G0 422 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 FAM151BQ6UXP7 276 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 SCUBE1Q8IWY4 988 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 RAVER1Q8IY67 606 aaKnown RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 SPATA4Q8NEY3 305 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 HMGB4Q8WW32 186 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 NELL1Q92832 810 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 LPPQ93052 612 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 KLHL15Q96M94 604 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 TCF25Q9BQ70 676 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 SPATA5L1Q9BVQ7 753 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 UGT2B28Q9BY64 529 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ABCB10Q9NRK6 738 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 RBM12Q9NTZ6 932 aaKnown RBP9.77□□□□□ -0.85
CHD3-202ENST00000358181 AGTP01019 485 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 ALOX5P09917 674 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 DDX6P26196 483 aaKnown RBP eCLIP9.77□□□□□ -0.85
CHD3-202ENST00000358181 CAP2P40123 477 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 AVPR1BP47901 424 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 CD151P48509 253 aa9.77□□□□□ -0.85
CHD3-202ENST00000358181 RPL19P84098 196 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms