RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TMEM79Q9BSE2 394 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 LMCD1Q9NZU5 365 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 NOD1Q9Y239 953 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 TIMM22Q9Y584 194 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 DNAJC15Q9Y5T4 150 aa20.48■□□□□ 0.87
COL13A1-202ENST00000357811 ARHGEF37A1IGU5 675 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 TNPO2O14787 897 aaKnown RBP20.47■□□□□ 0.87
COL13A1-202ENST00000357811 MUSKO15146 869 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 GPR182O15218 404 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 TNFAIP8O95379 198 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 GOT2P00505 430 aaKnown RBP20.47■□□□□ 0.87
COL13A1-202ENST00000357811 RBP1P09455 135 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 ADSLP30566 484 aaPredicted RBP20.47■□□□□ 0.87
COL13A1-202ENST00000357811 CYP2C18P33260 490 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 APLP1P51693 650 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 CLCN5P51795 746 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 HABP4Q5JVS0 413 aaKnown RBP20.47■□□□□ 0.87
COL13A1-202ENST00000357811 ZNF678Q5SXM1 525 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 ZNF549Q6P9A3 640 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 AFAP1L2Q8N4X5 818 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 DLG3Q92796 817 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 SEMA4BQ9NPR2 832 aaPredicted RBP20.47■□□□□ 0.87
COL13A1-202ENST00000357811 ZNF236Q9UL36 1845 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 H3BMM5 538 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 PIP5K1BO14986 540 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 SLC22A2O15244 555 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 SRP72O76094 671 aaKnown RBP20.47■□□□□ 0.87
COL13A1-202ENST00000357811 SEC24DO94855 1032 aaPredicted RBP20.47■□□□□ 0.87
COL13A1-202ENST00000357811 MT-ND1P03886 318 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 FAM163BP0C2L3 166 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 GFAPP14136 432 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 PCSK6P29122 969 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 TRIM32Q13049 653 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 ACAP2Q15057 778 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 OR4D1Q15615 310 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 CHSY3Q70JA7 882 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 CALML6Q8TD86 181 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 DGCR14Q96DF8 476 aaKnown RBP20.47■□□□□ 0.87
COL13A1-202ENST00000357811 RNF11Q9Y3C5 154 aa20.47■□□□□ 0.87
COL13A1-202ENST00000357811 ZNF189O75820 626 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-202ENST00000357811 HSPA1AP0DMV8 641 aaKnown RBP20.46■□□□□ 0.87
COL13A1-202ENST00000357811 HSPA1BP0DMV9 641 aaKnown RBP20.46■□□□□ 0.87
COL13A1-202ENST00000357811 ZNF33AQ06730 810 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 TUSC3Q13454 348 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 RFTN1Q14699 578 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-202ENST00000357811 PTPRRQ15256 657 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 C6orf10Q5SRN2 563 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 FBXL22Q6P050 247 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 LCA5Q86VQ0 697 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 SPPL2CQ8IUH8 684 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 FAM210AQ96ND0 272 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 A0A0J9YYE9 177 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 ATP6V1B2P21281 511 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 HOXC13P31276 330 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 OR1G1P47890 313 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 STX1BP61266 288 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 RHDQ02161 417 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 IKBKEQ14164 716 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 HMBOX1Q6NT76 420 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 C2orf69Q8N8R5 385 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 PTCD2Q8WV60 388 aaKnown RBP20.46■□□□□ 0.87
COL13A1-202ENST00000357811 TUBGCP3Q96CW5 907 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 HIC2Q96JB3 615 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 CNOT6Q9ULM6 557 aaKnown RBP20.46■□□□□ 0.87
COL13A1-202ENST00000357811 CCDC162PA2VCL2 907 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 IMPDH1P20839 514 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 KLHDC8BQ8IXV7 354 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 FAM81AQ8TBF8 368 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 SERPINB11Q96P15 392 aa20.46■□□□□ 0.87
COL13A1-202ENST00000357811 TRMT13Q9NUP7 481 aaKnown RBP20.46■□□□□ 0.87
COL13A1-202ENST00000357811 MIA3Q5JRA6 1907 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 SMIM31A0A1B0GVY4 71 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 TRIM24O15164 1050 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 LDB2O43679 373 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 TSPAN3O60637 253 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 CDK14O94921 469 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 CLIC3O95833 236 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 SLC2A3P11169 496 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 FUT11Q495W5 492 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 TRIM74Q86UV6 250 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 TRIM73Q86UV7 250 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 CATSPER1Q8NEC5 780 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 NCSTNQ92542 709 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 TSPAN17Q96FV3 270 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 MTG1Q9BT17 334 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-202ENST00000357811 ZYG11BQ9C0D3 744 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.45■□□□□ 0.86
COL13A1-202ENST00000357811 PIM1P11309 404 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-202ENST00000357811 AKR1A1P14550 325 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 OR1E1P30953 314 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 PLOD1Q02809 727 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-202ENST00000357811 C10orf120Q5SQS8 335 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 KRT80Q6KB66 452 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 ZBTB49Q6ZSB9 765 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 KIAA0408Q6ZU52 694 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 LARP4Q71RC2 724 aaKnown RBP eCLIP20.45■□□□□ 0.86
COL13A1-202ENST00000357811 DHFR2Q86XF0 187 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 VPS33AQ96AX1 596 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 SLC25A23Q9BV35 468 aa20.45■□□□□ 0.86
COL13A1-202ENST00000357811 SOCS2O14508 198 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms