RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 ARL13AQ5H913 290 aaPredicted RBP13.9□□□□□ -0.18
LSS-201ENST00000356396 PDPK2PQ6A1A2 396 aa13.9□□□□□ -0.18
LSS-201ENST00000356396 PAQR3Q6TCH7 311 aa13.9□□□□□ -0.18
LSS-201ENST00000356396 CILP2Q8IUL8 1156 aa13.9□□□□□ -0.18
LSS-201ENST00000356396 SCAMP4Q969E2 229 aa13.9□□□□□ -0.18
LSS-201ENST00000356396 UTP4Q969X6 686 aaKnown RBP13.9□□□□□ -0.18
LSS-201ENST00000356396 CDK15Q96Q40 435 aa13.9□□□□□ -0.18
LSS-201ENST00000356396 SEPT3Q9UH03 358 aa13.9□□□□□ -0.18
LSS-201ENST00000356396 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.9□□□□□ -0.18
LSS-201ENST00000356396 PLXNA3P51805 1871 aa13.9□□□□□ -0.18
LSS-201ENST00000356396 ANKRD66B4E2M5 251 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 UBXN8O00124 270 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 FCHO1O14526 889 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 KDELR3O43731 214 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 CACNG3O60359 315 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 GUCA1CO95843 209 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 SOX9P48436 509 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 PPP1R3AQ16821 1122 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 PTPRNQ16849 979 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 PABPC1LQ4VXU2 614 aaKnown RBP13.89□□□□□ -0.19
LSS-201ENST00000356396 DPY19L3Q6ZPD9 716 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 TMEM151AQ8N4L1 468 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 PSKH2Q96QS6 385 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 TDRD1Q9BXT4 1180 aaKnown RBP13.89□□□□□ -0.19
LSS-201ENST00000356396 LHX3Q9UBR4 397 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 COQ6Q9Y2Z9 468 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 ACOT9Q9Y305 439 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 PIKFYVEQ9Y2I7 2098 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 HEATR9A2RTY3 570 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 CCDC85CA6NKD9 419 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 CDC7O00311 574 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 S1PR4O95977 384 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 TFEBP19484 476 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 SERPINB5P36952 375 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 SERPINB8P50452 374 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 FYB2Q5VWT5 728 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 MBOAT1Q6ZNC8 495 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 BEND7Q8N7W2 519 aaPredicted RBP13.89□□□□□ -0.19
LSS-201ENST00000356396 NRTNQ99748 197 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 FRMD8Q9BZ67 464 aaPredicted RBP13.89□□□□□ -0.19
LSS-201ENST00000356396 RHOJQ9H4E5 214 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 POMKQ9H5K3 350 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 MRPS23Q9Y3D9 190 aaKnown RBP13.89□□□□□ -0.19
LSS-201ENST00000356396 TROVE2P10155 538 aaKnown RBP eCLIP13.89□□□□□ -0.19
LSS-201ENST00000356396 CHRM3P20309 590 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 SESN3P58005 492 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 OCRLQ01968 901 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 HABP4Q5JVS0 413 aaKnown RBP13.89□□□□□ -0.19
LSS-201ENST00000356396 RARS2Q5T160 578 aaKnown RBP13.89□□□□□ -0.19
LSS-201ENST00000356396 SMYD5Q6GMV2 418 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 C4orf22Q6V702 233 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 CLNKQ7Z7G1 428 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 VN1R2Q8NFZ6 395 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 LKAAEAR1Q8TD35 194 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 GPR21Q99679 349 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 C1QTNF1Q9BXJ1 281 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 MAGEH1Q9H213 219 aa13.89□□□□□ -0.19
LSS-201ENST00000356396 TRAV19A0A0A6YYK7 116 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 WASH4PA8MWX3 477 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 DCXO43602 365 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 GLRA3O75311 464 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 ZNF821O75541 412 aaPredicted RBP13.88□□□□□ -0.19
LSS-201ENST00000356396 TRIM16O95361 564 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 GLP2RO95838 553 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 PRDX3P30048 256 aaKnown RBP13.88□□□□□ -0.19
LSS-201ENST00000356396 CCNFP41002 786 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 RAB10P61026 200 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 PFKFB4Q16877 469 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 PLEKHG6Q3KR16 790 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 RINLQ6ZS11 566 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 ADGRG2Q8IZP9 1017 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 OR4L1Q8NH43 312 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 CCDC124Q96CT7 223 aaKnown RBP13.88□□□□□ -0.19
LSS-201ENST00000356396 ALG14Q96F25 216 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 GPR22Q99680 433 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 FBRSL1Q9HCM7 1045 aaKnown RBP13.88□□□□□ -0.19
LSS-201ENST00000356396 TDP1Q9NUW8 608 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 SIRPGQ9P1W8 387 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 PRSS21Q9Y6M0 314 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 NUP214P35658 2090 aaPredicted RBP13.88□□□□□ -0.19
LSS-201ENST00000356396 LOC285095A0A1B0GVY8 99 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 NPIPB15A6NHN6 443 aaPredicted RBP13.88□□□□□ -0.19
LSS-201ENST00000356396 ALADP13716 330 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 CDC25CP30307 473 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 SERPINB9P50453 376 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 TIAL1Q01085 375 aaKnown RBP eCLIP13.88□□□□□ -0.19
LSS-201ENST00000356396 RASA2Q15283 850 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 LRRC8EQ6NSJ5 796 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 TRIM74Q86UV6 250 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 TEX26Q8N6G2 289 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 PDZD8Q8NEN9 1154 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 MIPEPQ99797 713 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 STARD13Q9Y3M8 1113 aa13.88□□□□□ -0.19
LSS-201ENST00000356396 STX7O15400 261 aaKnown RBP13.87□□□□□ -0.19
LSS-201ENST00000356396 ENTPD5O75356 428 aa13.87□□□□□ -0.19
LSS-201ENST00000356396 SH3BGRLO75368 114 aa13.87□□□□□ -0.19
LSS-201ENST00000356396 SUPT7LO94864 414 aa13.87□□□□□ -0.19
LSS-201ENST00000356396 FOXA1P55317 472 aa13.87□□□□□ -0.19
LSS-201ENST00000356396 SLC25A3Q00325 362 aa13.87□□□□□ -0.19
LSS-201ENST00000356396 DLX2Q07687 328 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms