RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 NOMO1Q15155 1222 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 GALNTL6Q49A17 601 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 SH3D19Q5HYK7 790 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 SLC41A1Q8IVJ1 513 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 PYROXD2Q8N2H3 581 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 CPNE1Q99829 537 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 KCNN2Q9H2S1 579 aa10.91□□□□□ -0.66
CLCN6-202ENST00000346436 ARIH1Q9Y4X5 557 aaPredicted RBP10.91□□□□□ -0.66
CLCN6-202ENST00000346436 C1orf232A0A0U1RR37 186 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CPED1A4D0V7 1026 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 ITGA2BP08514 1039 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 PSMC3P17980 439 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CORO1AP31146 461 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 SKIV2L2P42285 1042 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 TTPAP49638 278 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 GHRHRQ02643 423 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 MSS51Q4VC12 460 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 AFTPHQ6ULP2 937 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 KYAT3Q6YP21 454 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 SAPCD2Q86UD0 394 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 PIGZQ86VD9 579 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 C1orf127Q8N9H9 656 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 NKD2Q969F2 451 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 MPP4Q96JB8 637 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CDCA3Q99618 268 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 ARHGEF3Q9NR81 526 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 IMP3Q9NV31 184 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CDC14AQ9UNH5 594 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 ZNF232Q9UNY5 417 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 ASF1AQ9Y294 204 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 WASF2Q9Y6W5 498 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 DPPA5A6NC42 116 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CLDN4O14493 209 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 PARGQ86W56 976 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CYP4Z2PQ8N1L4 340 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 PLD5Q8N7P1 536 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 BHLHE22Q8NFJ8 381 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 MAGED4Q96JG8 741 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 BTBD1Q9H0C5 482 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CATSPERZQ9NTU4 200 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CHURC1-FNTBB4DL54 471 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 BUD23O43709 281 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 KLK3P07288 261 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 ARF4P18085 180 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 AP5B1Q2VPB7 878 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 ALKBH2Q6NS38 261 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 TTC33Q6PID6 262 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 BPIFB1Q8TDL5 484 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 LHX5Q9H2C1 402 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 NSUN3Q9H649 340 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 ATAD3AQ9NVI7 634 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 SH3BP4Q9P0V3 963 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 TBC1D30Q9Y2I9 924 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 NELFEP18615 380 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 ARL2P36404 184 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CSTF3Q12996 717 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 INTS6LQ5JSJ4 861 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 BROXQ5VW32 411 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 C9orf57Q5W0N0 161 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 TRMT10BQ6PF06 316 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 STRADAQ7RTN6 431 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CERS2Q96G23 380 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 GRIP2Q9C0E4 1043 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CDH19Q9H159 772 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 NXF3Q9H4D5 531 aaKnown RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 FAM124BQ9H5Z6 455 aaPredicted RBP10.9□□□□□ -0.66
CLCN6-202ENST00000346436 PLLPQ9Y342 182 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 MYH3P11055 1940 aa10.9□□□□□ -0.66
CLCN6-202ENST00000346436 CPSF4O95639 269 aaKnown RBP10.9□□□□□ -0.67
CLCN6-202ENST00000346436 CCNHP51946 323 aaPredicted RBP10.9□□□□□ -0.67
CLCN6-202ENST00000346436 PGS1Q32NB8 556 aa10.9□□□□□ -0.67
CLCN6-202ENST00000346436 CCDC153Q494R4 210 aa10.9□□□□□ -0.67
CLCN6-202ENST00000346436 SRFBP1Q8NEF9 429 aaKnown RBP10.9□□□□□ -0.67
CLCN6-202ENST00000346436 ACOX2Q99424 681 aa10.9□□□□□ -0.67
CLCN6-202ENST00000346436 THUMPD3Q9BV44 507 aaKnown RBP10.9□□□□□ -0.67
CLCN6-202ENST00000346436 DUSP16Q9BY84 665 aa10.9□□□□□ -0.67
CLCN6-202ENST00000346436 ACE2Q9BYF1 805 aaPredicted RBP10.9□□□□□ -0.67
CLCN6-202ENST00000346436 WDR55Q9H6Y2 383 aaPredicted RBP10.9□□□□□ -0.67
CLCN6-202ENST00000346436 OPTCQ9UBM4 332 aa10.9□□□□□ -0.67
CLCN6-202ENST00000346436 SNX8Q9Y5X2 465 aa10.9□□□□□ -0.67
CLCN6-202ENST00000346436 CA9Q16790 459 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 PMF1Q6P1K2 205 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 GKN2Q86XP6 184 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 FAM98AQ8NCA5 519 aaKnown RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 OR56A4Q8NGH8 313 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 IRGQQ8WZA9 623 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 BADQ92934 168 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 CD101Q93033 1021 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 DPY30Q9C005 99 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 POMKQ9H5K3 350 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 DHX33Q9H6R0 707 aaKnown RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 NCKIPSDQ9NZQ3 722 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 A8MX80 341 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 UBDO15205 165 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 DAB1O75553 588 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 NFKB1P19838 968 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 IFNGR2P38484 337 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 RXRGP48443 463 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms