RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 KLHL14Q9P2G3 628 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 SLC39A10Q9ULF5 831 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 SSX2IPQ9Y2D8 614 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 ASB3Q9Y575 518 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 NOTCH4Q99466 2003 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 A0A096LPK6 155 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 HEATR9A2RTY3 570 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 H0Y626 953 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 GFRA2O00451 464 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 GIPC1O14908 333 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 TIMM44O43615 452 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 PLIN3O60664 434 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 CD160O95971 181 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 CKMP06732 381 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 PIRTP0C851 137 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 MYL4P12829 197 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 SYN1P17600 705 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 GSTT1P30711 240 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 CTNNB1P35222 781 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 SCNN1BP51168 640 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 CDK18Q07002 472 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 BST1Q10588 318 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 THOC5Q13769 683 aaKnown RBP9.28□□□□□ -0.92
ATG4A-202ENST00000345734 PTPRCAPQ14761 206 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 FASTKD1Q53R41 847 aaKnown RBP9.28□□□□□ -0.92
ATG4A-202ENST00000345734 TSTD2Q5T7W7 516 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 RNF43Q68DV7 783 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 ZNF470Q6ECI4 717 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 KIAA0930Q6ICG6 404 aaPredicted RBP9.28□□□□□ -0.92
ATG4A-202ENST00000345734 KYAT3Q6YP21 454 aaKnown RBP9.28□□□□□ -0.92
ATG4A-202ENST00000345734 ZCCHC23Q6ZST2 131 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 SLC41A1Q8IVJ1 513 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 MFSD6LQ8IWD5 586 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 RBM12BQ8IXT5 1001 aaKnown RBP9.28□□□□□ -0.92
ATG4A-202ENST00000345734 C7orf61Q8IZ16 206 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 RFWD2Q8NHY2 731 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 MRPS31Q92665 395 aaKnown RBP9.28□□□□□ -0.92
ATG4A-202ENST00000345734 N4BP2L2Q92802 583 aaPredicted RBP9.28□□□□□ -0.92
ATG4A-202ENST00000345734 PSKH2Q96QS6 385 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 RANBP9Q96S59 729 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 CORO1BQ9BR76 489 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 SMG9Q9H0W8 520 aaKnown RBP9.28□□□□□ -0.92
ATG4A-202ENST00000345734 RHOJQ9H4E5 214 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 LIN7BQ9HAP6 207 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 HCFC1R1Q9NWW0 138 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 MARK1Q9P0L2 795 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 CFAP97Q9P2B7 532 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 DCDC2Q9UHG0 476 aa9.28□□□□□ -0.92
ATG4A-202ENST00000345734 HELZP42694 1942 aaKnown RBP9.28□□□□□ -0.92
ATG4A-202ENST00000345734 REV3LO60673 3130 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 SLC35F4A4IF30 521 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 C2orf71A6NGG8 1288 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 MROH6A6NGR9 719 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 AURKAO14965 403 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 BUD23O43709 281 aaKnown RBP9.27□□□□□ -0.93
ATG4A-202ENST00000345734 SIN3BO75182 1162 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 UBOX5O94941 541 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 LATS1O95835 1130 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 PROCP04070 461 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 C2P06681 752 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 SERPINF2P08697 491 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 HSPA1AP0DMV8 641 aaKnown RBP9.27□□□□□ -0.93
ATG4A-202ENST00000345734 HSPA1BP0DMV9 641 aaKnown RBP9.27□□□□□ -0.93
ATG4A-202ENST00000345734 PAMP19021 973 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 BMPR1AP36894 532 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 AVPR1AP37288 418 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 CCR2P41597 374 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 TMPRSS15P98073 1019 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 LACTB2Q53H82 288 aaPredicted RBP9.27□□□□□ -0.93
ATG4A-202ENST00000345734 NEPROQ6NW34 567 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 CCDC149Q6ZUS6 474 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 BBS5Q8N3I7 341 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 FITM2Q8N6M3 262 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 HJURPQ8NCD3 748 aaPredicted RBP9.27□□□□□ -0.93
ATG4A-202ENST00000345734 C2CD4AQ8NCU7 369 aaPredicted RBP9.27□□□□□ -0.93
ATG4A-202ENST00000345734 BLOC1S5Q8TDH9 187 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 POF1BQ8WVV4 589 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 E2F7Q96AV8 911 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 TMA16Q96EY4 203 aaKnown RBP9.27□□□□□ -0.93
ATG4A-202ENST00000345734 FEM1CQ96JP0 617 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 SMIM14Q96QK8 99 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 TRIB3Q96RU7 358 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 GPR22Q99680 433 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 C20orf27Q9GZN8 174 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 NSMCE4AQ9NXX6 385 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 STK39Q9UEW8 545 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 CHKBQ9Y259 395 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 SLC4A7Q9Y6M7 1214 aa9.27□□□□□ -0.93
ATG4A-202ENST00000345734 OR51F1A6NGY5 319 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 J3QW42 95 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 KLF11O14901 512 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 BIRC5O15392 142 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 INSIG1O15503 277 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 PHGDHO43175 533 aaKnown RBP9.26□□□□□ -0.93
ATG4A-202ENST00000345734 LDB2O43679 373 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 RFPL2O75678 378 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ZMPSTE24O75844 475 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 HAUS5O94927 633 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 ARHGEF15O94989 841 aa9.26□□□□□ -0.93
ATG4A-202ENST00000345734 LUC7L3O95232 432 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms