RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 ADRB1P08588 477 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 CEACAM1P13688 526 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 PSMB4P28070 264 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 MMP13P45452 471 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 ARRB1P49407 418 aaPredicted RBP13.86□□□□□ -0.19
TPM4-202ENST00000344824 IFI35P80217 286 aaPredicted RBP13.86□□□□□ -0.19
TPM4-202ENST00000344824 SIM1P81133 766 aaPredicted RBP13.86□□□□□ -0.19
TPM4-202ENST00000344824 ELP6Q0PNE2 266 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 SUZ12Q15022 739 aaKnown RBP13.86□□□□□ -0.19
TPM4-202ENST00000344824 ZNF423Q2M1K9 1284 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 TMEM259Q4ZIN3 620 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 TEX44Q53QW1 395 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 MARC1Q5VT66 337 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 IZUMO3Q5VZ72 239 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 DUPD1Q68J44 220 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 ERAP2Q6P179 960 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 GSPT2Q8IYD1 628 aaKnown RBP13.86□□□□□ -0.19
TPM4-202ENST00000344824 MFSD2AQ8NA29 543 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 OR13H1Q8NG92 308 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 CCHCR1Q8TD31 782 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 RHBDD1Q8TEB9 315 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 MAML1Q92585 1016 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 SNF8Q96H20 258 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 ZNF599Q96NL3 588 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 ELF4Q99607 663 aaPredicted RBP13.86□□□□□ -0.19
TPM4-202ENST00000344824 RAB6BQ9NRW1 208 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 RSPH14Q9UHP6 348 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 COQ6Q9Y2Z9 468 aa13.86□□□□□ -0.19
TPM4-202ENST00000344824 GOLGA8CPA6NN73 597 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 A6NNZ2 444 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 C10orf142B7Z368 130 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 FLRT2O43155 660 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 SPINT1O43278 529 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 CTIFO43310 598 aaKnown RBP13.85□□□□□ -0.19
TPM4-202ENST00000344824 SDC3O75056 442 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 ZNF189O75820 626 aaPredicted RBP13.85□□□□□ -0.19
TPM4-202ENST00000344824 METTL18O95568 372 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 ZNF883P0CG24 379 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 NFKB1P19838 968 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 AP1S1P61966 158 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 FAM193AP78312 1265 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 FGL2Q14314 439 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 HLTFQ14527 1009 aaKnown RBP eCLIP13.85□□□□□ -0.19
TPM4-202ENST00000344824 INAVAQ3KP66 663 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 KDM7AQ6ZMT4 941 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 GCNT7Q6ZNI0 430 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 PIP4P1Q86T03 277 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 IFT20Q8IY31 132 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 CNTD1Q8N815 330 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 TMEM145Q8NBT3 493 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 LRRC45Q96CN5 670 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 PSKH2Q96QS6 385 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 TUBGCP5Q96RT8 1024 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 IL12RB2Q99665 862 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 PCDH12Q9NPG4 1184 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 DKK3Q9UBP4 350 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 BTBD3Q9Y2F9 522 aa13.85□□□□□ -0.19
TPM4-202ENST00000344824 GOLGA4Q13439 2230 aaKnown RBP13.85□□□□□ -0.19
TPM4-202ENST00000344824 A0A1B0GTQ1 180 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 DNALI1O14645 258 aaPredicted RBP13.84□□□□□ -0.19
TPM4-202ENST00000344824 FPGTO14772 594 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 RAD51BO15315 384 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 TM7SF2O76062 418 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 CPP00450 1065 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 TIMP2P16035 220 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 CD68P34810 354 aaPredicted RBP13.84□□□□□ -0.19
TPM4-202ENST00000344824 HSPA9P38646 679 aaKnown RBP13.84□□□□□ -0.19
TPM4-202ENST00000344824 CSNK1DP48730 415 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 LMAN1P49257 510 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 CARSP49589 748 aaKnown RBP13.84□□□□□ -0.19
TPM4-202ENST00000344824 ITGA8P53708 1063 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 VSNL1P62760 191 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 CALCOCO2Q13137 446 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 HNRNPDQ14103 355 aaKnown RBP13.84□□□□□ -0.19
TPM4-202ENST00000344824 UGP2Q16851 508 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 CCDC157Q569K6 752 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 ITPRIPL1Q6GPH6 555 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 BRAT1Q6PJG6 821 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 ZSWIM9Q86XI8 627 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 SPATS2Q86XZ4 545 aaKnown RBP13.84□□□□□ -0.19
TPM4-202ENST00000344824 PGBD5Q8N414 524 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 VOPP1Q96AW1 172 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 TEKT5Q96M29 485 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 ZNF641Q96N77 438 aaPredicted RBP13.84□□□□□ -0.19
TPM4-202ENST00000344824 VAT1Q99536 393 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 PARD6BQ9BYG5 372 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 CEP295Q9C0D2 2601 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 ETNK1Q9HBU6 452 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 FAM114A2Q9NRY5 505 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 TRHDEQ9UKU6 1024 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 ATP8A1Q9Y2Q0 1164 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 CHD8Q9HCK8 2581 aa13.84□□□□□ -0.19
TPM4-202ENST00000344824 POM121BA6NF01 834 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 A8MX80 341 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 E7EVH7 732 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 AREL1O15033 823 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 IVDP26440 423 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 EPHA8P29322 1005 aaPredicted RBP13.83□□□□□ -0.2
TPM4-202ENST00000344824 PLTPP55058 493 aa13.83□□□□□ -0.2
TPM4-202ENST00000344824 OVGP1Q12889 678 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms