RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 OR4K2Q8NGD2 314 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 HDAC7Q8WUI4 952 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 PSMG2Q969U7 264 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 TMEM120AQ9BXJ8 343 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 DNAJC28Q9NX36 388 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 GRIN2DO15399 1336 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 E9PBE3 544 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 KLHL41O60662 606 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 SEC24CP53992 1094 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 FLOT2Q14254 428 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 ZC3H12BQ5HYM0 836 aaKnown RBP16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 FNBP1LQ5T0N5 605 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 MAGED4Q96JG8 741 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 ATAD3AQ9NVI7 634 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 PIAS3Q9Y6X2 628 aa16.42■□□□□ 0.22
SMARCA4-201ENST00000344626 MAN2B1O00754 1011 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 TFEBP19484 476 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 TFE3P19532 575 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 GUCA1AP43080 201 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 BLKP51451 505 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 ATXN1P54253 815 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 DSC2Q02487 901 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 AGKQ53H12 422 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 SMYD5Q6GMV2 418 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 RHBDF2Q6PJF5 856 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 PTGR2Q8N8N7 351 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 USP7Q93009 1102 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 EME1Q96AY2 570 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 SEMA4BQ9NPR2 832 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 VWA7Q9Y334 891 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 ILVBLA1L0T0 632 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 DDX3YO15523 660 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 HOXA11P31270 313 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 HADHBP55084 474 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 PLOD1Q02809 727 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 RASGEF1CQ8N431 466 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 RDH11Q8TC12 318 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 CD101Q93033 1021 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 NKD2Q969F2 451 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 MYH13Q9UKX3 1938 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 AP2A1O95782 977 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 HLA-EP13747 358 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 RPL3P39023 403 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 TCEAL5Q5H9L2 206 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 PRMT9Q6P2P2 845 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 AENQ8WTP8 325 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 PHACTR1Q9C0D0 580 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 KLQ9UEF7 1012 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 PLK1P53350 603 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 HNRNPH2P55795 449 aaKnown RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 DUPD1Q68J44 220 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 TCAIMQ8N3R3 496 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 NDNQ99608 321 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 AMZ1Q400G9 498 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 CLLU1OSQ5K130 101 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 CHST15Q7LFX5 561 aaPredicted RBP16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 NIPA2Q8N8Q9 360 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 ZFP28Q8NHY6 868 aa16.41■□□□□ 0.22
SMARCA4-201ENST00000344626 ITGB4P16144 1822 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 PIPSLA2A3N6 862 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 CYP7B1O75881 506 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 EEF1DP29692 281 aaKnown RBP16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 POLD2P49005 469 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 CHRNB3Q05901 458 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 INCA1Q0VD86 236 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 ZNF852Q6ZMS4 543 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 OTUB2Q96DC9 234 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 CDCA3Q99618 268 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 SLC38A3Q99624 504 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 HPS4Q9NQG7 708 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 TULP2O00295 520 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 ALOX15BO15296 676 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 IFNA16P05015 189 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 CXCR3P49682 368 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 MIER2Q8N344 545 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 LINGO1Q96FE5 620 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 SMOC2Q9H3U7 446 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 CRTAC1Q9NQ79 661 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 GGA2Q9UJY4 613 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 KRT87PA6NCN2 255 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 C16orf96A6NNT2 1141 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 OTCP00480 354 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 FAM153BP0C7A2 387 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 H2AFXP16104 143 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 ACTN3Q08043 901 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 CNGA3Q16281 694 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 FAM153CQ494X1 144 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 BNC2Q6ZN30 1099 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 Q6ZVU0 165 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 IFNLR1Q8IU57 520 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 TMCO5AQ8N6Q1 288 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 GPN3Q9UHW5 284 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 FAF1Q9UNN5 650 aaPredicted RBP16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 COG5Q9UP83 839 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 MYO1CO00159 1063 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 TM7SF2O76062 418 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 ZNF844Q08AG5 666 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 CTBP1Q13363 440 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 DPYSL2Q16555 572 aa16.4■□□□□ 0.22
SMARCA4-201ENST00000344626 PTCRAQ6ISU1 281 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms