RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PHTF1Q9UMS5 762 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 PPP2R2CQ9Y2T4 447 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 AK5Q9Y6K8 562 aa18.08■□□□□ 0.49
USF2-202ENST00000343550 FZD6O60353 706 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 PIAS2O75928 621 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 MMP2P08253 660 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 LIG3P49916 1009 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 E2F1Q01094 437 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 INSM1Q01101 510 aaPredicted RBP18.08■□□□□ 0.48
USF2-202ENST00000343550 XRCC4Q13426 336 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 RTP5Q14D33 572 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 ARMC12Q5T9G4 340 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 DCP2Q8IU60 420 aaKnown RBP18.08■□□□□ 0.48
USF2-202ENST00000343550 CACTIN-AS1Q8N1I8 211 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 PIH1D2Q8WWB5 315 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 IFT43Q96FT9 208 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 PDLIM2Q96JY6 352 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 AGAP3Q96P47 875 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 DCBLD2Q96PD2 775 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 CLCA2Q9UQC9 943 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 PPIL1Q9Y3C6 166 aa18.08■□□□□ 0.48
USF2-202ENST00000343550 CFAP69A5D8W1 941 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 POM121BA6NF01 834 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 A6NNZ2 444 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 A8MX80 341 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 HACD1B0YJ81 288 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 FFAR2O15552 330 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 TJP3O95049 919 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 PTPN3P26045 913 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 DAB2P98082 770 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 RALGDSQ12967 914 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 SOWAHCQ53LP3 525 aaPredicted RBP18.07■□□□□ 0.48
USF2-202ENST00000343550 CCDC181Q5TID7 509 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 LIPIQ6XZB0 460 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 SCRN2Q96FV2 425 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 TEKT5Q96M29 485 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 CAAP1Q9H8G2 361 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 COQ6Q9Y2Z9 468 aa18.07■□□□□ 0.48
USF2-202ENST00000343550 CPP00450 1065 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 PRLP01236 227 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 GIMD1P0DJR0 217 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 C6P13671 934 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 CD86P42081 329 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 SKOR1P84550 965 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 OTUD4Q01804 1114 aaKnown RBP18.06■□□□□ 0.48
USF2-202ENST00000343550 WASHC5Q12768 1159 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 NOMO1Q15155 1222 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 ZNF542PQ5EBM4 170 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 MEI1Q5TIA1 1274 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 DPPA4Q7L190 304 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 PTAR1Q7Z6K3 402 aaPredicted RBP18.06■□□□□ 0.48
USF2-202ENST00000343550 DCBLD1Q8N8Z6 715 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 ACTL9Q8TC94 416 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 IMP4Q96G21 291 aaKnown RBP18.06■□□□□ 0.48
USF2-202ENST00000343550 GPR27Q9NS67 375 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 DNAJC28Q9NX36 388 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 B4GALT6Q9UBX8 382 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 CHKBQ9Y259 395 aa18.06■□□□□ 0.48
USF2-202ENST00000343550 NEMP2A6NFY4 417 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 FPGTO14772 594 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 MTSS1O43312 755 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 CKMT1AP12532 417 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 AGERQ15109 404 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 PTPRRQ15256 657 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 KYAT3Q6YP21 454 aaKnown RBP18.05■□□□□ 0.48
USF2-202ENST00000343550 CBARPQ8N350 705 aaPredicted RBP18.05■□□□□ 0.48
USF2-202ENST00000343550 TP53I13Q8NBR0 393 aaPredicted RBP18.05■□□□□ 0.48
USF2-202ENST00000343550 DENND6BQ8NEG7 585 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 HTR3CQ8WXA8 447 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 QKIQ96PU8 341 aaKnown RBP eCLIP18.05■□□□□ 0.48
USF2-202ENST00000343550 TDRD1Q9BXT4 1180 aaKnown RBP18.05■□□□□ 0.48
USF2-202ENST00000343550 SLC25A51Q9H1U9 297 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 C10orf88Q9H8K7 445 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 GLOD4Q9HC38 313 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 MBNL1Q9NR56 388 aaKnown RBP18.05■□□□□ 0.48
USF2-202ENST00000343550 NLGN3Q9NZ94 848 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 LRRK1Q38SD2 2015 aa18.05■□□□□ 0.48
USF2-202ENST00000343550 H7C0C1 242 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 SCAMP1O15126 338 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 TLX3O43711 291 aaPredicted RBP18.04■□□□□ 0.48
USF2-202ENST00000343550 LZTS3O60299 673 aaPredicted RBP18.04■□□□□ 0.48
USF2-202ENST00000343550 ALPPL2P10696 532 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 NFKBIAP25963 317 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 EIF2S3P41091 472 aaKnown RBP18.04■□□□□ 0.48
USF2-202ENST00000343550 ABCG1P45844 678 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 ATP5OP48047 213 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 HNRNPKP61978 463 aaKnown RBP eCLIP18.04■□□□□ 0.48
USF2-202ENST00000343550 KLF1Q13351 362 aaPredicted RBP18.04■□□□□ 0.48
USF2-202ENST00000343550 FZD2Q14332 565 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 GSE1Q14687 1217 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 TADA1Q96BN2 335 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 CRELD1Q96HD1 420 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 MCCC1Q96RQ3 725 aaPredicted RBP18.04■□□□□ 0.48
USF2-202ENST00000343550 RBM15Q96T37 977 aaKnown RBP eCLIP18.04■□□□□ 0.48
USF2-202ENST00000343550 VAT1Q99536 393 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 C1QTNF7Q9BXJ2 289 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 KCNF1Q9H3M0 494 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 PCDH9Q9HC56 1237 aa18.04■□□□□ 0.48
USF2-202ENST00000343550 SPTY2D1-AS1A0A0U1RR47 76 aa18.03■□□□□ 0.48
USF2-202ENST00000343550 MT-CO3P00414 261 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms