RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 MC1RQ01726 317 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 ABHD18Q0P651 414 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 ILF3Q12906 894 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRA2B-202ENST00000342294 SEPT6Q14141 434 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 CDO1Q16878 200 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 ATP1A1-AS1Q5TC04 95 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 TCTN3Q6NUS6 607 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 FAM129CQ86XR2 697 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 NRSN1Q8IZ57 195 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 CCDC185Q8N715 623 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 RXFP2Q8WXD0 754 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 STARD8Q92502 1023 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 CENPIQ92674 756 aaPredicted RBP16.9■□□□□ 0.3
TRA2B-202ENST00000342294 ECHDC3Q96DC8 303 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 PDFQ9HBH1 243 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 METTL5Q9NRN9 209 aaKnown RBP16.9■□□□□ 0.3
TRA2B-202ENST00000342294 TMEM184BQ9Y519 407 aaPredicted RBP16.9■□□□□ 0.3
TRA2B-202ENST00000342294 KCNMB2Q9Y691 235 aa16.9■□□□□ 0.3
TRA2B-202ENST00000342294 AGFG2O95081 481 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 FGFR1OPO95684 399 aaKnown RBP16.89■□□□□ 0.29
TRA2B-202ENST00000342294 MYCLP1P12525 358 aaPredicted RBP16.89■□□□□ 0.29
TRA2B-202ENST00000342294 CSNK1DP48730 415 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 HDAC4P56524 1084 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 PARP15Q460N3 678 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 CFAP58Q5T655 872 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 CAPRIN2Q6IMN6 1127 aaKnown RBP16.89■□□□□ 0.29
TRA2B-202ENST00000342294 DPPA4Q7L190 304 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 STRADAQ7RTN6 431 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 TEX19Q8NA77 164 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 GPT2Q8TD30 523 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 PTCD2Q8WV60 388 aaKnown RBP16.89■□□□□ 0.29
TRA2B-202ENST00000342294 NTAN1Q96AB6 310 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 FRMD8Q9BZ67 464 aaPredicted RBP16.89■□□□□ 0.29
TRA2B-202ENST00000342294 KCTD3Q9Y597 815 aa16.89■□□□□ 0.29
TRA2B-202ENST00000342294 C2CD4BA6NLJ0 364 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 WASH4PA8MWX3 477 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 TEX33O43247 280 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 ELFN1P0C7U0 828 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 TCN2P20062 427 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 PTPN9P43378 593 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 RGRP47804 291 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 NOMO3P69849 1222 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 GPLD1P80108 840 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 CTBSQ01459 385 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 RAPGEF1Q13905 1077 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 TAF3Q5VWG9 929 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 SLC30A9Q6PML9 568 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 ARHGAP22Q7Z5H3 698 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 UMODL1-AS1Q8N2C9 162 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 PYROXD2Q8N2H3 581 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 SSC4DQ8WTU2 575 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 CPA5Q8WXQ8 436 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 COQ10AQ96MF6 247 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 CTRCQ99895 268 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 ZPBPQ9BS86 351 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 TEX101Q9BY14 249 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 TRIT1Q9H3H1 467 aaKnown RBP16.88■□□□□ 0.29
TRA2B-202ENST00000342294 PRDM8Q9NQV8 689 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 FBXO8Q9NRD0 319 aa16.88■□□□□ 0.29
TRA2B-202ENST00000342294 UBA2Q9UBT2 640 aaPredicted RBP16.88■□□□□ 0.29
TRA2B-202ENST00000342294 BIN1O00499 593 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 DLGAP3O95886 979 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 GNLYP22749 145 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 EPHB2P29323 1055 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 SDC4P31431 198 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 BIRC2Q13490 618 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 FHL5Q5TD97 284 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 C16orf46Q6P387 395 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 CEACAM20Q6UY09 585 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 SRLQ86TD4 932 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 NOP9Q86U38 636 aaKnown RBP16.87■□□□□ 0.29
TRA2B-202ENST00000342294 GALNT11Q8NCW6 608 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 MSANTD4Q8NCY6 345 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 JOSD2Q8TAC2 188 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 SUDS3Q9H7L9 328 aaPredicted RBP16.87■□□□□ 0.29
TRA2B-202ENST00000342294 SUFUQ9UMX1 484 aa16.87■□□□□ 0.29
TRA2B-202ENST00000342294 GOLGA6L4A6NEF3 574 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 MKRN2OSH3BPM6 223 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 J3KR12 359 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 VPS4BO75351 444 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 STK17BO94768 372 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 RNF224P0DH78 156 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 F8A1P23610 371 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 SERPINA4P29622 427 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 ADCY8P40145 1251 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 STAT5AP42229 794 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 GNPDA1P46926 289 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 NAA35Q5VZE5 725 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 ASB18Q6ZVZ8 466 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 PHLDB2Q86SQ0 1253 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 HEATR4Q86WZ0 1026 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 CCDC13Q8IYE1 715 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 ATP13A3Q9H7F0 1226 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 APMAPQ9HDC9 416 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 PHPT1Q9NRX4 125 aaPredicted RBP16.86■□□□□ 0.29
TRA2B-202ENST00000342294 VPS4AQ9UN37 437 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 SLC17A4Q9Y2C5 497 aa16.86■□□□□ 0.29
TRA2B-202ENST00000342294 MRPS18BQ9Y676 258 aaKnown RBP16.86■□□□□ 0.29
TRA2B-202ENST00000342294 RP1L1Q8IWN7 2480 aaPredicted RBP16.86■□□□□ 0.29
TRA2B-202ENST00000342294 A8MX80 341 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms