RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.42■■□□□ 1.18
TRIM28-202ENST00000341753 TANC1Q9C0D5 1861 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 TMEM221A6NGB7 291 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 CBFA2T3O75081 653 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 POLR2IP36954 125 aaKnown RBP22.41■■□□□ 1.18
TRIM28-202ENST00000341753 ZNF829Q3KNS6 432 aaPredicted RBP22.41■■□□□ 1.18
TRIM28-202ENST00000341753 INTS11Q5TA45 600 aaKnown RBP22.41■■□□□ 1.18
TRIM28-202ENST00000341753 ZC3H7AQ8IWR0 971 aaKnown RBP22.41■■□□□ 1.18
TRIM28-202ENST00000341753 C2CD4AQ8NCU7 369 aaPredicted RBP22.41■■□□□ 1.18
TRIM28-202ENST00000341753 DDHD1Q8NEL9 900 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 TNIP3Q96KP6 325 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 HNRNPABQ99729 332 aaKnown RBP22.41■■□□□ 1.18
TRIM28-202ENST00000341753 ABHD16BQ9H3Z7 469 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 FLRT1Q9NZU1 646 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 TCAF1Q9Y4C2 921 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 CORINQ9Y5Q5 1042 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 FUOMA2VDF0 154 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 LRRC14BA6NHZ5 514 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 SNAP29O95721 258 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 DARSP14868 501 aaKnown RBP22.41■■□□□ 1.18
TRIM28-202ENST00000341753 CES1P23141 567 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 GNA12Q03113 381 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 GRB7Q14451 532 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 INPP5AQ14642 412 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 CYP51A1Q16850 503 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 KIAA0319Q5VV43 1072 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 NEPROQ6NW34 567 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 PCYOX1LQ8NBM8 494 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 COLEC11Q9BWP8 271 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 PIF1Q9H611 641 aa22.41■■□□□ 1.18
TRIM28-202ENST00000341753 ARPC2O15144 300 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 ACOX3O15254 700 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 BDNFP23560 247 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 BMXP51813 675 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 ATP6AP1Q15904 470 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 ANKRD26P1Q6NSI1 321 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 ADGRG5Q8IZF4 528 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 VPS50Q96JG6 964 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 MTG1Q9BT17 334 aaPredicted RBP22.4■■□□□ 1.18
TRIM28-202ENST00000341753 WDCPQ9H6R7 721 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 TMEM30AQ9NV96 361 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 TBC1D13Q9NVG8 400 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 PTBP2Q9UKA9 531 aaKnown RBP22.4■■□□□ 1.18
TRIM28-202ENST00000341753 UBQLN1Q9UMX0 589 aaKnown RBP22.4■■□□□ 1.18
TRIM28-202ENST00000341753 MEIS3P2A8K0S8 358 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 DCKP27707 260 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 CCT8P50990 548 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 AGAP9Q5VTM2 703 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 WSCD1Q658N2 575 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 PLEKHH3Q7Z736 793 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 PIM3Q86V86 326 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 DDIASQ8IXT1 998 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 RYBPQ8N488 228 aaPredicted RBP22.4■■□□□ 1.18
TRIM28-202ENST00000341753 ADAMTS16Q8TE57 1224 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 RNF34Q969K3 372 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 VAT1Q99536 393 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 GPATCH1Q9BRR8 931 aaKnown RBP22.4■■□□□ 1.18
TRIM28-202ENST00000341753 C9orf16Q9BUW7 83 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 DERAQ9Y315 318 aa22.4■■□□□ 1.18
TRIM28-202ENST00000341753 LTA4HP09960 611 aaKnown RBP22.39■■□□□ 1.18
TRIM28-202ENST00000341753 MATN1P21941 496 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 TAF6P49848 677 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 KPNA2P52292 529 aaKnown RBP22.39■■□□□ 1.18
TRIM28-202ENST00000341753 FOXA1P55317 472 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 POU4F1Q01851 419 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 CCL14Q16627 93 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 GPR158Q5T848 1215 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 ABRAXAS1Q6UWZ7 409 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 ALKAL1Q6UXT8 129 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 SEPT8Q92599 483 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 NTAN1Q96AB6 310 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 CENPNQ96H22 339 aaPredicted RBP22.39■■□□□ 1.18
TRIM28-202ENST00000341753 ZFP42Q96MM3 310 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 KCNA7Q96RP8 456 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 FSD1LQ9BXM9 530 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 RHOBTB2Q9BYZ6 727 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 USP22Q9UPT9 525 aa22.39■■□□□ 1.18
TRIM28-202ENST00000341753 ZNF701M0R085 212 aaPredicted RBP22.39■■□□□ 1.17
TRIM28-202ENST00000341753 ANGPT2O15123 496 aa22.39■■□□□ 1.17
TRIM28-202ENST00000341753 EEF1B2P24534 225 aaKnown RBP22.39■■□□□ 1.17
TRIM28-202ENST00000341753 RXRGP48443 463 aa22.39■■□□□ 1.17
TRIM28-202ENST00000341753 ZIK1Q3SY52 487 aaPredicted RBP22.39■■□□□ 1.17
TRIM28-202ENST00000341753 FUT11Q495W5 492 aa22.39■■□□□ 1.17
TRIM28-202ENST00000341753 RABL3Q5HYI8 236 aa22.39■■□□□ 1.17
TRIM28-202ENST00000341753 GRAMD4Q6IC98 578 aa22.39■■□□□ 1.17
TRIM28-202ENST00000341753 DNAJB14Q8TBM8 379 aa22.39■■□□□ 1.17
TRIM28-202ENST00000341753 DPF3Q92784 378 aa22.39■■□□□ 1.17
TRIM28-202ENST00000341753 FXYD1O00168 92 aa22.38■■□□□ 1.17
TRIM28-202ENST00000341753 KCNH1O95259 989 aa22.38■■□□□ 1.17
TRIM28-202ENST00000341753 SIX3O95343 332 aaPredicted RBP22.38■■□□□ 1.17
TRIM28-202ENST00000341753 ELK4P28324 431 aa22.38■■□□□ 1.17
TRIM28-202ENST00000341753 DAOAP59103 153 aa22.38■■□□□ 1.17
TRIM28-202ENST00000341753 UGT3A2Q3SY77 523 aa22.38■■□□□ 1.17
TRIM28-202ENST00000341753 HACD2Q6Y1H2 254 aa22.38■■□□□ 1.17
TRIM28-202ENST00000341753 DHRSXQ8N5I4 330 aa22.38■■□□□ 1.17
TRIM28-202ENST00000341753 SLC15A4Q8N697 577 aa22.38■■□□□ 1.17
TRIM28-202ENST00000341753 PACRGLQ8N7B6 248 aa22.38■■□□□ 1.17
TRIM28-202ENST00000341753 AAR2Q9Y312 384 aaKnown RBP22.38■■□□□ 1.17
TRIM28-202ENST00000341753 TIMM13Q9Y5L4 95 aaPredicted RBP22.38■■□□□ 1.17
TRIM28-202ENST00000341753 INHBBP09529 407 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms