RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 DCDC2BA2VCK2 349 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ARHGAP42A6NI28 874 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 EEF2KO00418 725 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 PES1O00541 588 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 NDC80O14777 642 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 YKT6O15498 198 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 RNGTTO60942 597 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 KAT7O95251 611 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 AGR2O95994 175 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TCF4P15884 667 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 GJA1P17302 382 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 OXTRP30559 389 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ADRA1AP35348 466 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 MAGEA3P43357 314 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 FNTAP49354 379 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 IRAK1P51617 712 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DCDC1P59894 354 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 AP1S1P61966 158 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 SUMO1P63165 101 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 MTAPQ13126 283 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 CYTH1Q15438 398 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 CDKN3Q16667 212 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 P3H1Q32P28 736 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 INAVAQ3KP66 663 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TUBB8Q3ZCM7 444 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ARSJQ5FYB0 599 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TXNRD3NBQ6F5E7 133 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DCUN1D2Q6PH85 259 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TXNDC11Q6PKC3 985 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ZNF574Q6ZN55 896 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 LGI2Q8N0V4 545 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 UBL4BQ8N7F7 174 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 IL17RCQ8NAC3 791 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 OR2T3Q8NH03 318 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 RSAD2Q8WXG1 361 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ALG3Q92685 438 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TMA16Q96EY4 203 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ALS2CR12Q96Q35 445 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 BHLHE41Q9C0J9 482 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DUSP15Q9H1R2 295 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 LINC00597Q9H2U6 94 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 BRD9Q9H8M2 597 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 MRM3Q9HC36 420 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ELOVL2Q9NXB9 296 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 KCTD5Q9NXV2 234 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DTLQ9NZJ0 730 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 CTTNBP2NLQ9P2B4 639 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 PCYOX1Q9UHG3 505 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 XPO7Q9UIA9 1087 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TUBD1Q9UJT1 453 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 SNX12Q9UMY4 172 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 APOBEC2Q9Y235 224 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 GOLGA6L7A0A1B0GV03 622 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 LOC285095A0A1B0GVY8 99 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 PRR19A6NJB7 356 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ERI2A8K979 691 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 RASA4BC9J798 803 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 F5H423 210 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 KRIT1O00522 736 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 CDX4O14627 284 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 RASA4O43374 803 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 LATO43561 262 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 PLRG1O43660 514 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DFNA5O60443 496 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DNAJA2O60884 412 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TBL1XO60907 577 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 PALMO75781 387 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 IPO7O95373 1038 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 MT-CO1P00395 513 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 EGFP01133 1207 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 MMP2P08253 660 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 SRCP12931 536 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 NME1P15531 152 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TCP1P17987 556 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ERCC2P18074 760 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 NME2P22392 152 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 MSNP26038 577 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 NTSR1P30989 418 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 CD70P32970 193 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 MPLP40238 635 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ACVR1Q04771 509 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 SFSWAPQ12872 951 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 CCNG2Q16589 344 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 SLC45A4Q5BKX6 768 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 RAP1GAP2Q684P5 730 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 NCEH1Q6PIU2 408 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TPRG1Q6ZUI0 275 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 RSRC2Q7L4I2 434 aaKnown RBP3.53□□□□□ -1.84
CCDC66-202ENST00000341455 GALNT7Q86SF2 657 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 IQCHQ86VS3 1027 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 CHSY1Q86X52 802 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DNAAF5Q86Y56 855 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DCLK2Q8N568 766 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 DENND6BQ8NEG7 585 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 FLCNQ8NFG4 579 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 RAPGEF5Q92565 580 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 TTC9Q92623 222 aa3.53□□□□□ -1.84
CCDC66-202ENST00000341455 ORAI3Q9BRQ5 295 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms