RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 LONRF1Q17RB8 773 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 SPDYCQ5MJ68 293 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 ZNF776Q68DI1 518 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-201ENST00000341181 FAM76AQ8TAV0 307 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 PPP1R16AQ96I34 528 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 MRGPRX1Q96LB2 322 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 TTC25Q96NG3 672 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 LYSMD1Q96S90 227 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 SLC17A6Q9P2U8 582 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 A0A1W2PP55 124 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 RNASEH1O60930 286 aaKnown RBP20.63■□□□□ 0.89
CLDND1-201ENST00000341181 POLBP06746 335 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 F7P08709 466 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-201ENST00000341181 HPDP32754 393 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-201ENST00000341181 MMP12P39900 470 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 POLR2LP62875 67 aaKnown RBP20.63■□□□□ 0.89
CLDND1-201ENST00000341181 NUMA1Q14980 2115 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 TAF1AQ15573 450 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-201ENST00000341181 HSF5Q4G112 596 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-201ENST00000341181 TSTD2Q5T7W7 516 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 PIP5KL1Q5T9C9 394 aa20.63■□□□□ 0.89
CLDND1-201ENST00000341181 UHRF1Q96T88 793 aaPredicted RBP20.63■□□□□ 0.89
CLDND1-201ENST00000341181 NOVA2Q9UNW9 492 aaKnown RBP20.63■□□□□ 0.89
CLDND1-201ENST00000341181 SCN8AQ9UQD0 1980 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 C1QAP02745 245 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 DCNP07585 359 aaKnown RBP20.62■□□□□ 0.89
CLDND1-201ENST00000341181 RALGDSQ12967 914 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 AGBL4Q5VU57 503 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 FBXL19Q6PCT2 694 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 ERN2Q76MJ5 926 aaKnown RBP20.62■□□□□ 0.89
CLDND1-201ENST00000341181 SYNPOQ8N3V7 929 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 OR4K2Q8NGD2 314 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 GSDMBQ8TAX9 411 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 HCAR2Q8TDS4 363 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 FBF1Q8TES7 1133 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 PTCD2Q8WV60 388 aaKnown RBP20.62■□□□□ 0.89
CLDND1-201ENST00000341181 NAT9Q9BTE0 207 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 SUDS3Q9H7L9 328 aaPredicted RBP20.62■□□□□ 0.89
CLDND1-201ENST00000341181 ZFYVE1Q9HBF4 777 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 MRM3Q9HC36 420 aaKnown RBP20.62■□□□□ 0.89
CLDND1-201ENST00000341181 DYRK4Q9NR20 520 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 FNDC3AQ9Y2H6 1198 aaKnown RBP20.62■□□□□ 0.89
CLDND1-201ENST00000341181 A0A1W2PQ67 120 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 GOLGA6L10A6NI86 522 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 ADH1BP00325 375 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 NEK3P51956 506 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 FAM46CQ5VWP2 391 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 RFLNAQ6ZTI6 216 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 PNPLA1Q8N8W4 532 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 GPR63Q9BZJ6 419 aa20.62■□□□□ 0.89
CLDND1-201ENST00000341181 ZDBF2Q9HCK1 2354 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 MAGEB16A2A368 324 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 OR51F1A6NGY5 319 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 CHURC1-FNTBB4DL54 471 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 CRTAMO95727 393 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 GABRG2P18507 467 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 XPAP23025 273 aaPredicted RBP20.61■□□□□ 0.89
CLDND1-201ENST00000341181 HMGCLP35914 325 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 PTSQ03393 145 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.61■□□□□ 0.89
CLDND1-201ENST00000341181 HMGB4Q8WW32 186 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 HDAC8Q9BY41 377 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 SMYD2Q9NRG4 433 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 CTNNAL1Q9UBT7 734 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 AREL1O15033 823 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 GPR39O43194 453 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 RNASEH2AO75792 299 aaKnown RBP20.61■□□□□ 0.89
CLDND1-201ENST00000341181 VAPBO95292 243 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 ERVK-10P10266 1014 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 C5AR1P21730 350 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 TAS2R38P59533 333 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 TMEM31Q5JXX7 168 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 CWF19L1Q69YN2 538 aaKnown RBP20.61■□□□□ 0.89
CLDND1-201ENST00000341181 SYT13Q7L8C5 426 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 CCNJLQ8IV13 435 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 HDDC3Q8N4P3 179 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 SIPA1Q96FS4 1042 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 HHIPQ96QV1 700 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 WRAP53Q9BUR4 548 aaKnown RBP20.61■□□□□ 0.89
CLDND1-201ENST00000341181 MOCS1Q9NZB8 636 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 HACD3Q9P035 362 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 IL17CQ9P0M4 197 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 RABGEF1Q9UJ41 708 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 FAM169AQ9Y6X4 670 aa20.61■□□□□ 0.89
CLDND1-201ENST00000341181 C2orf81A6NN90 581 aa20.6■□□□□ 0.89
CLDND1-201ENST00000341181 CXorf49A8MYA2 514 aaPredicted RBP20.6■□□□□ 0.89
CLDND1-201ENST00000341181 ABHD2P08910 425 aa20.6■□□□□ 0.89
CLDND1-201ENST00000341181 ARCN1P48444 511 aaKnown RBP20.6■□□□□ 0.89
CLDND1-201ENST00000341181 SIGLEC14Q08ET2 396 aa20.6■□□□□ 0.89
CLDND1-201ENST00000341181 KBTBD12Q3ZCT8 623 aa20.6■□□□□ 0.89
CLDND1-201ENST00000341181 SPANXN3Q5MJ09 141 aa20.6■□□□□ 0.89
CLDND1-201ENST00000341181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.6■□□□□ 0.89
CLDND1-201ENST00000341181 TBATAQ96M53 351 aa20.6■□□□□ 0.89
CLDND1-201ENST00000341181 NELL2Q99435 816 aa20.6■□□□□ 0.89
CLDND1-201ENST00000341181 TRABDQ9H4I3 376 aa20.6■□□□□ 0.89
CLDND1-201ENST00000341181 C1SP09871 688 aa20.59■□□□□ 0.89
CLDND1-201ENST00000341181 LPOP22079 712 aaPredicted RBP20.59■□□□□ 0.89
CLDND1-201ENST00000341181 VIPR1P32241 457 aa20.59■□□□□ 0.89
CLDND1-201ENST00000341181 EIF3BP55884 814 aaKnown RBP20.59■□□□□ 0.89
CLDND1-201ENST00000341181 MAGOHP61326 146 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms