RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 PLIN5Q00G26 463 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 SQLEQ14534 574 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 POLD3Q15054 466 aaPredicted RBP11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 MAP7D1Q3KQU3 841 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 ZIK1Q3SY52 487 aaPredicted RBP11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 NEPROQ6NW34 567 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 TMEM53Q6P2H8 277 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 BORAQ6PGQ7 559 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 GPR141Q7Z602 305 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 SAPCD2Q86UD0 394 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 ATPAF2Q8N5M1 289 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 PPTC7Q8NI37 304 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 PPP1R14BQ96C90 147 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 MRGPRX2Q96LB1 330 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 ADI1Q9BV57 179 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 DNAI2Q9GZS0 605 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 NACA2Q9H009 215 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 MEAF6Q9HAF1 191 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 IPPQ9Y573 584 aa11.98□□□□□ -0.49
CCDC144CP-201ENST00000340196 MAGEB16A2A368 324 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 SLCO1B7G3V0H7 640 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 LSM1O15116 133 aaKnown RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 NPHS1O60500 1241 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 LINC00032P0C843 101 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 POLR2IP36954 125 aaKnown RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 DIO3P55073 304 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 AARS2Q5JTZ9 985 aaKnown RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 HABP4Q5JVS0 413 aaKnown RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 LDLRAP1Q5SW96 308 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 TFAP2DQ7Z6R9 452 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 RASAL3Q86YV0 1011 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 DDIASQ8IXT1 998 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 LZTR1Q8N653 840 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 SMG8Q8ND04 991 aaKnown RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 PPHLN1Q8NEY8 458 aaKnown RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 OR2T34Q8NGX1 318 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 OR6P1Q8NGX9 317 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 OR2T3Q8NH03 318 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 ESAMQ96AP7 390 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 TMEM209Q96SK2 561 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 SEPHS2Q99611 448 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 PAIP1Q9H074 479 aaKnown RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 RBM22Q9NW64 420 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 CMTM6Q9NX76 183 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 DNAJC15Q9Y5T4 150 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 TSC2P49815 1807 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 HTR3EA5X5Y0 456 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 CASTOR2A6NHX0 329 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 FXYD1O00168 92 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 PIP5K1BO14986 540 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 SNAP29O95721 258 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 PRKAA2P54646 552 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 CD300CQ08708 224 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 ITKQ08881 620 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 UBXN11Q5T124 520 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 TBPL2Q6SJ96 375 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 PDZD4Q76G19 769 aaPredicted RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 LYSMD3Q7Z3D4 306 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 NANOGNBQ7Z5D8 188 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 GPR180Q86V85 440 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 C2CD4AQ8NCU7 369 aaPredicted RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 MAGEE2Q8TD90 523 aaPredicted RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 GIPC3Q8TF64 312 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 ZNF560Q96MR9 790 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 GLOD4Q9HC38 313 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 GDAP2Q9NXN4 497 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 UTP6Q9NYH9 597 aaKnown RBP11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 TRHDEQ9UKU6 1024 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 NEU3Q9UQ49 428 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 TIMM22Q9Y584 194 aa11.97□□□□□ -0.49
CCDC144CP-201ENST00000340196 DHRS12A0PJE2 317 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 MANSC4A6NHS7 340 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 ERI2A8K979 691 aaKnown RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 SLC22A2O15244 555 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 INPP4BO15327 924 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 MAFKO60675 156 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 KCNH1O95259 989 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 SNAI1O95863 264 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 CYP2C9P11712 490 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 CA8P35219 290 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 CLCNKBP51801 687 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 SH3BGRP55822 239 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 PFKPQ01813 784 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 KYAT1Q16773 422 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 LARP4Q71RC2 724 aaKnown RBP eCLIP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 ERMP1Q7Z2K6 904 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 PLEKHH3Q7Z736 793 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 PBXIP1Q96AQ6 731 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 C19orf60Q96EN9 201 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 HBEGFQ99075 208 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 TCF12Q99081 682 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 ARPC5LQ9BPX5 153 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 POLR1BQ9H9Y6 1135 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 IPO11Q9UI26 975 aaKnown RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 NCF1BA6NI72 391 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 NCF1CA8MVU1 366 aaPredicted RBP11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 F8W810 466 aa11.96□□□□□ -0.49
CCDC144CP-201ENST00000340196 H3BMQ9 156 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms