RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SCNN1GP51170 649 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 FRG1Q14331 258 aaKnown RBP16.14■□□□□ 0.17
SCARB1-202ENST00000339570 SNX17Q15036 470 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 IMPG1Q17R60 797 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 DNAJC14Q6Y2X3 702 aaPredicted RBP16.14■□□□□ 0.17
SCARB1-202ENST00000339570 SLC15A3Q8IY34 581 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 OR10Q1Q8NGQ4 319 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 MYLPFQ96A32 169 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 MRGPRX2Q96LB1 330 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 CCDC90BQ9GZT6 254 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 PFDN4Q9NQP4 134 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 SLC8A2Q9UPR5 921 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 VWA7Q9Y334 891 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 NDUFAF1Q9Y375 327 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 A0A087WXM4 84 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ENPP3O14638 875 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 TOR1BO14657 336 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 GPR32O75388 356 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ANXA9O76027 345 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 PRDX3P30048 256 aaKnown RBP16.14■□□□□ 0.17
SCARB1-202ENST00000339570 PRKAA2P54646 552 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 LSM3P62310 102 aaKnown RBP16.14■□□□□ 0.17
SCARB1-202ENST00000339570 BFSP2Q13515 415 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 GALNT3Q14435 633 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 RAB39AQ14964 217 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 CYHR1Q6ZMK1 362 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ZC3H7AQ8IWR0 971 aaKnown RBP16.14■□□□□ 0.17
SCARB1-202ENST00000339570 FNDC8Q8TC99 324 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 TWIST2Q8WVJ9 160 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 NT5C3BQ969T7 300 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 CDK15Q96Q40 435 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ING2Q9H160 280 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 GSTO2Q9H4Y5 243 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ZFYVE28Q9HCC9 887 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 CMTM6Q9NX76 183 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 IPO11Q9UI26 975 aaKnown RBP16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ZBBXA8MT70 800 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 FZD9O00144 591 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 PTGESO14684 152 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ARPC2O15144 300 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ZSCAN9O15535 394 aaPredicted RBP16.14■□□□□ 0.17
SCARB1-202ENST00000339570 NPHS1O60500 1241 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 B3GAT3O94766 335 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 UGT1A1P22309 533 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 UGT1A4P22310 534 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 UGT1A3P35503 534 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 UGT1A5P35504 534 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ITGADQ13349 1161 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 MAMDC4Q6UXC1 1216 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 TFAP2CQ92754 450 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 RANBP9Q96S59 729 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 DNAI2Q9GZS0 605 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 PCDH12Q9NPG4 1184 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 NSMCE4AQ9NXX6 385 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 VPS28Q9UK41 221 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ACTL7AQ9Y615 435 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 ARL5AQ9Y689 179 aa16.14■□□□□ 0.17
SCARB1-202ENST00000339570 A0A0G2JLL6 359 aaPredicted RBP16.13■□□□□ 0.17
SCARB1-202ENST00000339570 MTSS1O43312 755 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 RPL26P61254 145 aaKnown RBP16.13■□□□□ 0.17
SCARB1-202ENST00000339570 CD300CQ08708 224 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 SLC10A7Q0GE19 358 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 FOXD4Q12950 439 aaPredicted RBP16.13■□□□□ 0.17
SCARB1-202ENST00000339570 SEMA3BQ13214 749 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 INPP5AQ14642 412 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 ANKRD34AQ69YU3 496 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 ELMSAN1Q6PJG2 1045 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 ERMP1Q7Z2K6 904 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 PRRT2Q7Z6L0 340 aaPredicted RBP16.13■□□□□ 0.17
SCARB1-202ENST00000339570 MIOSQ9NXC5 875 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 GTF2IRD1Q9UHL9 959 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 ZFC3H1O60293 1989 aaKnown RBP16.13■□□□□ 0.17
SCARB1-202ENST00000339570 TCRBV3S1A0A5B6 114 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 SNAI1O95863 264 aaPredicted RBP16.13■□□□□ 0.17
SCARB1-202ENST00000339570 PHEXP78562 749 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 CBX3Q13185 183 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 LAPTM5Q13571 262 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 RFTN1Q14699 578 aaPredicted RBP16.13■□□□□ 0.17
SCARB1-202ENST00000339570 TBPL2Q6SJ96 375 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 MIB1Q86YT6 1006 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 CAMK1DQ8IU85 385 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 TMEM181Q9P2C4 612 aa16.13■□□□□ 0.17
SCARB1-202ENST00000339570 MAFKO60675 156 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 ALDH4A1P30038 563 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 KPNA2P52292 529 aaKnown RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 CBLBQ13191 982 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 POLD3Q15054 466 aaPredicted RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 PERM1Q5SV97 790 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 GRAMD4Q6IC98 578 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 CLEC4FQ8N1N0 589 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 C2CD4AQ8NCU7 369 aaPredicted RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 OR13C4Q8NGS5 318 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 MAELQ96JY0 434 aaKnown RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 EXOC2Q96KP1 924 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 PPM1MQ96MI6 270 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 MEAF6Q9HAF1 191 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 TMLHEQ9NVH6 421 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 CD300AQ9UGN4 299 aa16.12■□□□□ 0.17
SCARB1-202ENST00000339570 TRIP12Q14669 1992 aaPredicted RBP16.12■□□□□ 0.17
SCARB1-202ENST00000339570 PAPPA2Q9BXP8 1791 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms