RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 BIRC2Q13490 618 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 UBAP2LQ14157 1087 aaKnown RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 SKIDA1Q1XH10 827 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 PHF13Q86YI8 300 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 PELI3Q8N2H9 469 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 AGBL5Q8NDL9 886 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 NUS1Q96E22 293 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 CELF6Q96J87 481 aaKnown RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 PCDHB18PQ96TA0 734 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 DDA1Q9BW61 102 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 CINPQ9BW66 212 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 PHPT1Q9NRX4 125 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 TAAR2Q9P1P5 351 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 ZNF891A8MT65 544 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 A8MX80 341 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 TRAFD1O14545 582 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 CSTF2P33240 577 aaKnown RBP eCLIP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 CCR10P46092 362 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 PAPOLAP51003 745 aaKnown RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 POLR2FP61218 127 aaKnown RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 UBE2HP62256 183 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 CLEC16AQ2KHT3 1053 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 DPCR1Q3MIW9 517 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 TCP11X2Q5H9J9 407 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 DNAJC24Q6P3W2 148 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 MON1BQ7L1V2 547 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 HEATR4Q86WZ0 1026 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 CACNA2D3Q8IZS8 1091 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 OR4D9Q8NGE8 314 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 PATE1Q8WXA2 126 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 ART4Q93070 314 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 COQ10AQ96MF6 247 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 CATSPER2Q96P56 530 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 MCEEQ96PE7 176 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 CNPY3Q9BT09 278 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 SLC39A8Q9C0K1 460 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 SP110Q9HB58 689 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 SAMSN1Q9NSI8 373 aaKnown RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 TRNAU1APQ9NX07 287 aaKnown RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 TAB2Q9NYJ8 693 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 B4GALT6Q9UBX8 382 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 DACH1Q9UI36 760 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 B3GALT1Q9Y5Z6 326 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 TCRBV5S1A1TA0A578 114 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 RAD1O60671 282 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 CEACAM5P06731 702 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 THRAP10827 490 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 EEF1GP26641 437 aaKnown RBP11.49□□□□□ -0.57
CSMD2-202ENST00000338325 AK4P27144 223 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-202ENST00000338325 CSF2RBP32927 897 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 CASRP41180 1078 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 GNPDA1P46926 289 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 KLK7P49862 253 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 AP1S1P61966 158 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 FOXK1P85037 733 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 NSUN2Q08J23 767 aaKnown RBP eCLIP11.49□□□□□ -0.57
CSMD2-202ENST00000338325 PEX6Q13608 980 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 RFTN1Q14699 578 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-202ENST00000338325 NKAIN2Q5VXU1 208 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 SLC30A9Q6PML9 568 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 LURAP1LQ8IV03 231 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 NAGSQ8N159 534 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 DPYSL5Q9BPU6 564 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 TEX101Q9BY14 249 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 FRMD8Q9BZ67 464 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-202ENST00000338325 ASPSCR1Q9BZE9 553 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 VPS16Q9H269 839 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 NLRC4Q9NPP4 1024 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 FAM207AQ9NSI2 230 aaPredicted RBP11.49□□□□□ -0.57
CSMD2-202ENST00000338325 KCTD5Q9NXV2 234 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 SLC39A1Q9NY26 324 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 ANAPC2Q9UJX6 822 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 SUFUQ9UMX1 484 aa11.49□□□□□ -0.57
CSMD2-202ENST00000338325 IGHV1OR21-1A0A087WYE8 117 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 EEF2KO00418 725 aaKnown RBP11.48□□□□□ -0.57
CSMD2-202ENST00000338325 PPM1DO15297 605 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 CAPN5O15484 640 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-202ENST00000338325 FUCA1P04066 466 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 GP1BBP13224 206 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 DESP17661 470 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 RAB15P59190 212 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 RPL7AP62424 266 aaKnown RBP11.48□□□□□ -0.57
CSMD2-202ENST00000338325 CDK3Q00526 305 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 SQSTM1Q13501 440 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 SYCP1Q15431 976 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 CNGA3Q16281 694 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 DCAF12Q5T6F0 453 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 C9orf43Q8TAL5 461 aaPredicted RBP11.48□□□□□ -0.57
CSMD2-202ENST00000338325 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 SLC45A3Q96JT2 553 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 ZMYND15Q9H091 742 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 GPATCH2LQ9NWQ4 482 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 KCNK4Q9NYG8 393 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 AP4E1Q9UPM8 1137 aa11.48□□□□□ -0.57
CSMD2-202ENST00000338325 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.47□□□□□ -0.57
CSMD2-202ENST00000338325 CLEC18AA5D8T8 446 aa11.47□□□□□ -0.57
CSMD2-202ENST00000338325 EFCAB7A8K855 629 aa11.47□□□□□ -0.57
CSMD2-202ENST00000338325 B4E171 279 aa11.47□□□□□ -0.57
CSMD2-202ENST00000338325 EIF3CLB5ME19 914 aaKnown RBP11.47□□□□□ -0.57
CSMD2-202ENST00000338325 DFFAO00273 331 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms