RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 BTBD3Q9Y2F9 522 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 CYB5AP00167 134 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 ATP5A1P25705 553 aaKnown RBP12.28□□□□□ -0.44
FN1-202ENST00000336916 KLHL26Q53HC5 615 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 LRRC46Q96FV0 321 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 MYO19Q96H55 970 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 RPL26L1Q9UNX3 145 aaKnown RBP12.28□□□□□ -0.44
FN1-202ENST00000336916 MYO5AQ9Y4I1 1855 aaKnown RBP12.28□□□□□ -0.44
FN1-202ENST00000336916 TEX46H3BTG2 121 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 MPZL2O60487 215 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 PLIN5Q00G26 463 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 CAMK1Q14012 370 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 SF1Q15637 639 aaKnown RBP12.28□□□□□ -0.44
FN1-202ENST00000336916 TMEM164Q5U3C3 297 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 C16orf59Q7L2K0 433 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 HOPXQ9BPY8 73 aaPredicted RBP12.28□□□□□ -0.44
FN1-202ENST00000336916 RASSF1Q9NS23 344 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 ING3Q9NXR8 418 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 PRPF19Q9UMS4 504 aaKnown RBP12.28□□□□□ -0.44
FN1-202ENST00000336916 CNTNAP1P78357 1384 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 A0A1B0GVM2 712 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 TCAF2A6NFQ2 919 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 NDUFS1P28331 727 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 SMCO1Q147U7 214 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 LLGL2Q6P1M3 1020 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 NET1Q7Z628 596 aaPredicted RBP12.28□□□□□ -0.44
FN1-202ENST00000336916 MCEMP1Q8IX19 187 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 CDH19Q9H159 772 aa12.28□□□□□ -0.44
FN1-202ENST00000336916 UBE2QL1A1L167 161 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 SEPT4O43236 478 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 VIPP01282 170 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 SPIRE1Q08AE8 756 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 ZC3H12AQ5D1E8 599 aaKnown RBP12.27□□□□□ -0.44
FN1-202ENST00000336916 RFKQ969G6 155 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 AP2M1Q96CW1 435 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 PRMT5O14744 637 aaPredicted RBP12.27□□□□□ -0.44
FN1-202ENST00000336916 CLOCKO15516 846 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 FARP2O94887 1054 aaPredicted RBP12.27□□□□□ -0.44
FN1-202ENST00000336916 TCF4P15884 667 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 IL12RB1P42701 662 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 NME5P56597 212 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 SLC44A4Q53GD3 710 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 STK32CQ86UX6 486 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 KIF2BQ8N4N8 673 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 TTC29Q8NA56 475 aaPredicted RBP12.27□□□□□ -0.44
FN1-202ENST00000336916 PFKMP08237 780 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 CASRP41180 1078 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 NDST2P52849 883 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 AP1S1P61966 158 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 C12orf50Q8NA57 414 aaPredicted RBP12.27□□□□□ -0.44
FN1-202ENST00000336916 SEPHS2Q99611 448 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 RHOJQ9H4E5 214 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 THUMPD1Q9NXG2 353 aaKnown RBP12.27□□□□□ -0.44
FN1-202ENST00000336916 RAP2CQ9Y3L5 183 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 TSC22D4Q9Y3Q8 395 aa12.27□□□□□ -0.44
FN1-202ENST00000336916 POP4O95707 220 aaKnown RBP12.27□□□□□ -0.45
FN1-202ENST00000336916 C1RP00736 705 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 LPIN1Q14693 890 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 NPAS4Q8IUM7 802 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 S100ZQ8WXG8 99 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 FUBP3Q96I24 572 aaKnown RBP eCLIP12.27□□□□□ -0.454e-15■□□□□ 10.6
FN1-202ENST00000336916 ACBD6Q9BR61 282 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 GGT7Q9UJ14 662 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 A0A087X0B3 334 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 EIF4E1BA6NMX2 242 aaKnown RBP12.27□□□□□ -0.45
FN1-202ENST00000336916 PSMB9P28065 219 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 FLT3LGP49771 235 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 MTM1Q13496 603 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 RAP1GAP2Q684P5 730 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 EFHD2Q96C19 240 aaPredicted RBP12.27□□□□□ -0.45
FN1-202ENST00000336916 FEM1CQ96JP0 617 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 FNDC11Q9BVV2 318 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 KCND1Q9NSA2 647 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 COL1A1P02452 1464 aaPredicted RBP12.27□□□□□ -0.45
FN1-202ENST00000336916 CAPN1P07384 714 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 NR2C1P13056 603 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 GABRR2P28476 465 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 AKT2P31751 481 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 RPL4P36578 427 aaKnown RBP12.27□□□□□ -0.45
FN1-202ENST00000336916 WDR59Q6PJI9 974 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 VGLL2Q8N8G2 317 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 MDM1Q8TC05 714 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 CSPG4P5Q96PW8 444 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 MAGEH1Q9H213 219 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 ZCCHC17Q9NP64 241 aaKnown RBP12.27□□□□□ -0.45
FN1-202ENST00000336916 LRIG2O94898 1065 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 SLC34A1Q06495 639 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 OASLQ15646 514 aaKnown RBP12.27□□□□□ -0.45
FN1-202ENST00000336916 KBTBD8Q8NFY9 601 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 ZHX1-C8orf76Q96EF9 292 aa12.27□□□□□ -0.45
FN1-202ENST00000336916 ISM1B1AKI9 464 aa12.26□□□□□ -0.45
FN1-202ENST00000336916 OR1D2P34982 312 aa12.26□□□□□ -0.45
FN1-202ENST00000336916 CPA2P48052 419 aa12.26□□□□□ -0.45
FN1-202ENST00000336916 TPGS2Q68CL5 300 aa12.26□□□□□ -0.45
FN1-202ENST00000336916 ABRAXAS1Q6UWZ7 409 aa12.26□□□□□ -0.45
FN1-202ENST00000336916 CPNE2Q96FN4 548 aaPredicted RBP12.26□□□□□ -0.45
FN1-202ENST00000336916 SHCBP1LQ9BZQ2 653 aa12.26□□□□□ -0.45
FN1-202ENST00000336916 ZNF624Q9P2J8 865 aaPredicted RBP12.26□□□□□ -0.45
FN1-202ENST00000336916 SLC12A4Q9UP95 1085 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms