RNA–Protein interactions for RNA: ENST00000336294.9

TMEM39B-201, Transcript of transmembrane protein 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39B, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-201ENST00000336294 SPG21Q9NZD8 308 aa16.7■□□□□ 0.26
TMEM39B-201ENST00000336294 SSX2IPQ9Y2D8 614 aa16.7■□□□□ 0.26
TMEM39B-201ENST00000336294 LRCH1Q9Y2L9 728 aa16.7■□□□□ 0.26
TMEM39B-201ENST00000336294 SPO11Q9Y5K1 396 aa16.7■□□□□ 0.26
TMEM39B-201ENST00000336294 LOC100653049A0A140TA62 436 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 ABHD14A-ACY1A0A1B0GW23 586 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 C2orf81A6NN90 581 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 KRT34O76011 436 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 C1RP00736 705 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 PENKP01210 267 aaPredicted RBP16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 THRAP10827 490 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 KCNA5P22460 613 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 PIK3R1P27986 724 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 PPARGP37231 505 aaPredicted RBP16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 SUOXP51687 545 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 ACTR3P61158 418 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 C1orf146Q5VVC0 180 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 LRRC74BQ6ZQY2 392 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 FRMD7Q6ZUT3 714 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 DDX53Q86TM3 631 aaKnown RBP16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 PIM3Q86V86 326 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 TCEAL8Q8IYN2 117 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 ACTRT2Q8TDY3 377 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 NSMCE3Q96MG7 304 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 PANX3Q96QZ0 392 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 AARSD1Q9BTE6 412 aaKnown RBP16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 OSBPL1AQ9BXW6 950 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 ADGRE3Q9BY15 652 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 ALG9Q9H6U8 611 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 TMEM39AQ9NV64 488 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 NMRK1Q9NWW6 199 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 SMPD4Q9NXE4 827 aa16.69■□□□□ 0.26
TMEM39B-201ENST00000336294 CARNS1A5YM72 827 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 TBL1XO60907 577 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 PRLP01236 227 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 F11P03951 625 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 PSMA3P25788 255 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 MNX1P50219 401 aaPredicted RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 ARF5P84085 180 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 SATB1Q01826 763 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 GALNT1Q10472 559 aaPredicted RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 NXNQ6DKJ4 435 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 IRGCQ6NXR0 463 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 ISCA2Q86U28 154 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 KIRREL3Q8IZU9 778 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 LPCAT1Q8NF37 534 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 VWCEQ96DN2 955 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 LENG8Q96PV6 779 aaPredicted RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 ZNF385DQ9H6B1 395 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 MAFFQ9ULX9 164 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 ATP11BQ9Y2G3 1177 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 RAI2Q9Y5P3 530 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 INSL5Q9Y5Q6 135 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 TYW5A2RUC4 315 aaKnown RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 RGSL1A5PLK6 1076 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 A6NHS1 94 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 H0Y626 953 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 CCNT2O60583 730 aaKnown RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 SMIM24O75264 130 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 TMCC1O94876 653 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 HNRNPLP14866 589 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 ITGAXP20702 1163 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 IMPDH1P20839 514 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 ABL2P42684 1182 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 SULT2A1Q06520 285 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 RALGPS1Q5JS13 557 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 FAM117BQ6P1L5 589 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 ITIH5Q86UX2 942 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 CMTR2Q8IYT2 770 aaKnown RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 CARNMT1Q8N4J0 409 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 HJURPQ8NCD3 748 aaPredicted RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 OR4K2Q8NGD2 314 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 L3HYPDHQ96EM0 354 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 MAELQ96JY0 434 aaKnown RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 ZFRQ96KR1 1074 aaKnown RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 TCF12Q99081 682 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 TRMOQ9BU70 441 aa16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 RC3H2Q9HBD1 1191 aaKnown RBP16.68■□□□□ 0.26
TMEM39B-201ENST00000336294 TMEM233B4DJY2 109 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 JUNP05412 331 aaKnown RBP16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 CD1DP15813 335 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 LPOP22079 712 aaPredicted RBP16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 SP100P23497 879 aaPredicted RBP16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 PLK1P53350 603 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 NFKB2Q00653 900 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 BTKQ06187 659 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 KLC1Q07866 573 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 PDAP1Q13442 181 aaKnown RBP16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 TMEM150AQ86TG1 271 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 CUZD1Q86UP6 607 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 MDGA1Q8NFP4 955 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 RP9Q8TA86 221 aaKnown RBP16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 PHF21BQ96EK2 531 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 CATSPER2Q96P56 530 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 MRPL17Q9NRX2 175 aaKnown RBP16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 SUFUQ9UMX1 484 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 PCDHGC4Q9Y5F7 938 aa16.67■□□□□ 0.26
TMEM39B-201ENST00000336294 LTBP2Q14767 1821 aa16.66■□□□□ 0.26
TMEM39B-201ENST00000336294 ANAPC1Q9H1A4 1944 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms