RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 PLA2G4EQ3MJ16 856 aa14.86□□□□□ -0.03
UBA1-201ENST00000335972 HABP4Q5JVS0 413 aaKnown RBP14.86□□□□□ -0.03
UBA1-201ENST00000335972 OGFRL1Q5TC84 451 aaPredicted RBP14.86□□□□□ -0.03
UBA1-201ENST00000335972 SLC30A9Q6PML9 568 aa14.86□□□□□ -0.03
UBA1-201ENST00000335972 LINGO4Q6UY18 593 aa14.86□□□□□ -0.03
UBA1-201ENST00000335972 CALML6Q8TD86 181 aa14.86□□□□□ -0.03
UBA1-201ENST00000335972 LPGAT1Q92604 370 aa14.86□□□□□ -0.03
UBA1-201ENST00000335972 SARS2Q9NP81 518 aaKnown RBP14.86□□□□□ -0.03
UBA1-201ENST00000335972 GKN1Q9NS71 199 aa14.86□□□□□ -0.03
UBA1-201ENST00000335972 CACNA2D2Q9NY47 1150 aa14.86□□□□□ -0.03
UBA1-201ENST00000335972 UTP6Q9NYH9 597 aaKnown RBP14.86□□□□□ -0.03
UBA1-201ENST00000335972 PDP2Q9P2J9 529 aa14.86□□□□□ -0.03
UBA1-201ENST00000335972 TMEM88BA6NKF7 163 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 MRASO14807 208 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ADAM12O43184 909 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 TIAL1Q01085 375 aaKnown RBP eCLIP14.85□□□□□ -0.03
UBA1-201ENST00000335972 RTP2Q5QGT7 225 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 SCML4Q8N228 414 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 PELI3Q8N2H9 469 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 PTCD2Q8WV60 388 aaKnown RBP14.85□□□□□ -0.03
UBA1-201ENST00000335972 BTN2A3PQ96KV6 586 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 FBXO44Q9H4M3 255 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ATP13A1Q9HD20 1204 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 PCDHGC4Q9Y5F7 938 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ENPP3O14638 875 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 OAZ2O95190 189 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 GJB5O95377 273 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 UGT1A6P19224 532 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 SGSHP51688 502 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 SLC7A2P52569 658 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 SERINC3Q13530 473 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ADGRE1Q14246 886 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 VPS26BQ4G0F5 336 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ZNF678Q5SXM1 525 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 SLC24A5Q71RS6 500 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 DIS3LQ8TF46 1054 aaKnown RBP14.85□□□□□ -0.03
UBA1-201ENST00000335972 HBEGFQ99075 208 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 VCX3BQ9H321 246 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 AKTIPQ9H8T0 292 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 MRM3Q9HC36 420 aaKnown RBP14.85□□□□□ -0.03
UBA1-201ENST00000335972 EGFL7Q9UHF1 273 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 RIMS3Q9UJD0 308 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 AP4B1Q9Y6B7 739 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 MROH6A6NGR9 719 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ZNF839A8K0R7 811 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 SUPT3HB4E1H0 165 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ACOT8O14734 319 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 SUPT3HO75486 399 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ZNF189O75820 626 aaPredicted RBP14.85□□□□□ -0.03
UBA1-201ENST00000335972 RBP1P09455 135 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 KPNA2P52292 529 aaKnown RBP14.85□□□□□ -0.03
UBA1-201ENST00000335972 NDST2P52849 883 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 MSANTD2Q6P1R3 559 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 PAQR3Q6TCH7 311 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ABI1Q8IZP0 508 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 ST13P4Q8IZP2 240 aaPredicted RBP14.85□□□□□ -0.03
UBA1-201ENST00000335972 OR4K2Q8NGD2 314 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 NUDT8Q8WV74 236 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 MAELQ96JY0 434 aaKnown RBP14.85□□□□□ -0.03
UBA1-201ENST00000335972 C1orf74Q96LT6 269 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 UROC1Q96N76 676 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 PIF1Q9H611 641 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 SNX13Q9Y5W8 968 aa14.85□□□□□ -0.03
UBA1-201ENST00000335972 PIP5K1BO14986 540 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 PRDX3P30048 256 aaKnown RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 ARL1P40616 181 aaPredicted RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 CASP2P42575 452 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 AGTR2P50052 363 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 APLP1P51693 650 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 DSC1Q08554 894 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 ACAP2Q15057 778 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 NFE2Q16621 373 aaPredicted RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 CNPY1Q3B7I2 92 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 RETREG3Q86VR2 466 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 IFNEQ86WN2 208 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 DENND1CQ8IV53 801 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 NMD3Q96D46 503 aaKnown RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 ARNT2Q9HBZ2 717 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 EML4Q9HC35 981 aaKnown RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 POLR3BQ9NW08 1133 aaPredicted RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 CCDC160A6NGH7 325 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 CDC7O00311 574 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 OR1I1O60431 355 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 CD1DP15813 335 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 TACR2P21452 398 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 RPL10P27635 214 aaKnown RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 GSTT1P30711 240 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 ACLYP53396 1101 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 DNAJB13P59910 316 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 IRF5Q13568 498 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 RARS2Q5T160 578 aaKnown RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 KIAA0408Q6ZU52 694 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 BEND5Q7L4P6 421 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 C19orf60Q96EN9 201 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 TSPAN17Q96FV3 270 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 SLC30A3Q99726 388 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 POLR1EQ9GZS1 481 aaKnown RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 UPF3AQ9H1J1 476 aaKnown RBP14.84□□□□□ -0.03
UBA1-201ENST00000335972 MFSD1Q9H3U5 465 aa14.84□□□□□ -0.03
UBA1-201ENST00000335972 DNAJC15Q9Y5T4 150 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 222.5 ms