RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 CRHR2Q13324 411 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 ATAD1Q8NBU5 361 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 NCSTNQ92542 709 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 LPGAT1Q92604 370 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 FBXO32Q969P5 355 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 POLR1EQ9GZS1 481 aaKnown RBP23.41■■□□□ 1.34
NDEL1-201ENST00000334527 POLR3BQ9NW08 1133 aaPredicted RBP23.41■■□□□ 1.34
NDEL1-201ENST00000334527 MARCH2Q9P0N8 246 aa23.41■■□□□ 1.34
NDEL1-201ENST00000334527 OR1E1P30953 314 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 ACVR1Q04771 509 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 GK3PQ14409 553 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 GALNT3Q14435 633 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 PARP15Q460N3 678 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 CLLU1OSQ5K130 101 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 C10orf120Q5SQS8 335 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 RRAGCQ9HB90 399 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 GABRQQ9UN88 632 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 SRP72O76094 671 aaKnown RBP23.4■■□□□ 1.34
NDEL1-201ENST00000334527 PBX3P40426 434 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 STX1BP61266 288 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 TIAL1Q01085 375 aaKnown RBP eCLIP23.4■■□□□ 1.34
NDEL1-201ENST00000334527 VARS2Q5ST30 1063 aaKnown RBP23.4■■□□□ 1.34
NDEL1-201ENST00000334527 EP400NLQ6ZTU2 488 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 PTGR2Q8N8N7 351 aaPredicted RBP23.4■■□□□ 1.34
NDEL1-201ENST00000334527 KLHDC9Q8NEP7 349 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 NAT14Q8WUY8 206 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 EME1Q96AY2 570 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.4■■□□□ 1.34
NDEL1-201ENST00000334527 APPL1Q9UKG1 709 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 CROTQ9UKG9 612 aa23.4■■□□□ 1.34
NDEL1-201ENST00000334527 SLC12A8A0AV02 714 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 CCDC162PA2VCL2 907 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 DRGXA6NNA5 263 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 MUSKO15146 869 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 PIRTP0C851 137 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 ETS2P15036 469 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 CALRP27797 417 aaKnown RBP23.39■■□□□ 1.33
NDEL1-201ENST00000334527 SH3BP2P78314 561 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 RHDQ02161 417 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 SEMA3AQ14563 771 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 ZNF235Q14590 738 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 UGT3A2Q3SY77 523 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 MRNIPQ6NTE8 343 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 RTN4RL1Q86UN2 441 aaPredicted RBP23.39■■□□□ 1.33
NDEL1-201ENST00000334527 COLGALT2Q8IYK4 626 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 CLYBLQ8N0X4 340 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 OR13C4Q8NGS5 318 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 ARHGAP39Q9C0H5 1083 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 SEMA6AQ9H2E6 1030 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 CD300AQ9UGN4 299 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 LZTS1Q9Y250 596 aa23.39■■□□□ 1.33
NDEL1-201ENST00000334527 SMIM31A0A1B0GVY4 71 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 ALDOCP09972 364 aaKnown RBP23.38■■□□□ 1.33
NDEL1-201ENST00000334527 ATP4BP51164 291 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 TRAP1Q12931 704 aaKnown RBP23.38■■□□□ 1.33
NDEL1-201ENST00000334527 TRIM71Q2Q1W2 868 aaKnown RBP23.38■■□□□ 1.33
NDEL1-201ENST00000334527 MYEOVQ96EZ4 313 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 FEM1CQ96JP0 617 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 SIX3O95343 332 aaPredicted RBP23.38■■□□□ 1.33
NDEL1-201ENST00000334527 FGF1P05230 155 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 HLA-DPA1P20036 260 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 NKX3-2P78367 333 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 MYBPC1Q00872 1141 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 OR4D1Q15615 310 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 MGAT5BQ3V5L5 792 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 CTXN3Q4LDR2 81 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 FAM26DQ5JW98 314 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 CYP2R1Q6VVX0 501 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 LRTOMTQ8WZ04 291 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 AKTIPQ9H8T0 292 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 OLA1Q9NTK5 396 aaKnown RBP23.38■■□□□ 1.33
NDEL1-201ENST00000334527 IL37Q9NZH6 218 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 TMEM181Q9P2C4 612 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 DNAJC15Q9Y5T4 150 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 AK5Q9Y6K8 562 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 SLC4A7Q9Y6M7 1214 aa23.38■■□□□ 1.33
NDEL1-201ENST00000334527 TMEM189-UBE2V1I3L0A0 370 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 UBXN8O00124 270 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 RPP40O75818 363 aaKnown RBP23.37■■□□□ 1.33
NDEL1-201ENST00000334527 OR6B1O95007 311 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 TNFAIP8O95379 198 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 CLPTM1O96005 669 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 MAGEA11P43364 429 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 ACADVLP49748 655 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 TAF10Q12962 218 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 GEN1Q17RS7 908 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 KIF19Q2TAC6 998 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 SAMD4BQ5PRF9 694 aaKnown RBP23.37■■□□□ 1.33
NDEL1-201ENST00000334527 AHI1Q8N157 1196 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 GPR150Q8NGU9 434 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 SLC39A3Q9BRY0 314 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 MID1IP1Q9NPA3 183 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 CNOT11Q9UKZ1 510 aaKnown RBP23.37■■□□□ 1.33
NDEL1-201ENST00000334527 COMMD3-BMI1R4GMX3 469 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 LRRC14BA6NHZ5 514 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 PPP6CO00743 305 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 PRAMEF11O60813 436 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 CDK14O94921 469 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 CSPG5O95196 566 aa23.37■■□□□ 1.33
NDEL1-201ENST00000334527 ZNF37AP17032 561 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms