RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ADAMTS10Q9H324 1103 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 MEAF6Q9HAF1 191 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 DSEQ9UL01 958 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 GPC6Q9Y625 555 aaPredicted RBP13.76□□□□□ -0.21
SYNE3-201ENST00000334258 ANKRD12Q6UB98 2062 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 PAPPA2Q9BXP8 1791 aa13.76□□□□□ -0.21
SYNE3-201ENST00000334258 NCAM1P13591 858 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 NCK1P16333 377 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 ELK4P28324 431 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 MFSD6LQ8IWD5 586 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 RYBPQ8N488 228 aaPredicted RBP13.75□□□□□ -0.21
SYNE3-201ENST00000334258 DNAJB14Q8TBM8 379 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 HDAC11Q96DB2 347 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 CXCL16Q9H2A7 254 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 ATXN3LQ9H3M9 355 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 PIGVQ9NUD9 493 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 HACD3Q9P035 362 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 GTF2IRD1Q9UHL9 959 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 PRELID1Q9Y255 219 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 DOCK3Q8IZD9 2030 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 A8MT66 165 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 CLPXO76031 633 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 INHBBP09529 407 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 NOS2P35228 1153 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 NDUFV1P49821 464 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 NEK2P51955 445 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 CCNYL2Q5T2Q4 361 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 FAM117BQ6P1L5 589 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 PKN3Q6P5Z2 889 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 DCLRE1AQ6PJP8 1040 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 ARMCX2Q7L311 632 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 IGFN1Q86VF2 1251 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 NAT16Q8N8M0 369 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 ZUFSPQ96AP4 578 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 ROPN1LQ96C74 230 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 CCDC138Q96M89 665 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 RAD21L1Q9H4I0 556 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 SLC2A6Q9UGQ3 507 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 ITGB1BP2Q9UKP3 347 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 TRHDEQ9UKU6 1024 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 SOBPA7XYQ1 873 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 CXCL11O14625 94 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 ARPC2O15144 300 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 CNOT3O75175 753 aaKnown RBP13.75□□□□□ -0.21
SYNE3-201ENST00000334258 RASAL1O95294 804 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 MT-CYBP00156 380 aaPredicted RBP13.75□□□□□ -0.21
SYNE3-201ENST00000334258 LDLRP01130 860 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 SLC1A2P43004 574 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 PSMD5Q16401 504 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 KCTD11Q693B1 232 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 SFRP1Q8N474 314 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 NPWQ8N729 165 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 PNPLA1Q8N8W4 532 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 TRPV3Q8NET8 790 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 C18orf25Q96B23 403 aaPredicted RBP13.75□□□□□ -0.21
SYNE3-201ENST00000334258 SLC45A3Q96JT2 553 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 DOK1Q99704 481 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 RHOBTB2Q9BYZ6 727 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 TMEM9Q9P0T7 183 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 NDUFAF1Q9Y375 327 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 TCAF1Q9Y4C2 921 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 ST14Q9Y5Y6 855 aa13.75□□□□□ -0.21
SYNE3-201ENST00000334258 DCLK1O15075 740 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 MTSS1O43312 755 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 SULT1C4O75897 302 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 TGFB3P10600 412 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 CPB1P15086 417 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 GRM5P41594 1212 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 TRPC1P48995 793 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 CCT8P50990 548 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 HUNKP57058 714 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 ATP6AP1Q15904 470 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 PCID2Q5JVF3 399 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 FUNDC1Q8IVP5 155 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 STON2Q8WXE9 905 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 CCDC126Q96EE4 140 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 HOPXQ9BPY8 73 aaPredicted RBP13.74□□□□□ -0.21
SYNE3-201ENST00000334258 GIN1Q9NXP7 522 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 FBXO5Q9UKT4 447 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 KRBA1A5PL33 1030 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 AURKAO14965 403 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 HBP1O60381 514 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 PMPCBO75439 489 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 ADRA1BP35368 520 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 RAD23AP54725 363 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 ATP6V0D1P61421 351 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 TNK2Q07912 1038 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 CYBRD1Q53TN4 286 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 RBM20Q5T481 1227 aaKnown RBP13.74□□□□□ -0.21
SYNE3-201ENST00000334258 PPHLN1Q8NEY8 458 aaKnown RBP13.74□□□□□ -0.21
SYNE3-201ENST00000334258 C19orf60Q96EN9 201 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 MUS81Q96NY9 551 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 KIFC1Q9BW19 673 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 DGCR6LQ9BY27 220 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 SEZ6LQ9BYH1 1024 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 KLHL25Q9H0H3 589 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 PALMDQ9NP74 551 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 PSME2Q9UL46 239 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 SNX10Q9Y5X0 201 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms