RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 NELFEP18615 380 aaKnown RBP13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 OR1G1P47890 313 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 ARPP19P56211 112 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 C6orf10Q5SRN2 563 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 AMIGO2Q86SJ2 522 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 LRRC49Q8IUZ0 686 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 CFAP52Q8N1V2 620 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 NAT14Q8WUY8 206 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 NCSTNQ92542 709 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 SH3GL3Q99963 347 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 CRISPLD1Q9H336 500 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 AKTIPQ9H8T0 292 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 RRAGCQ9HB90 399 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 PCDHB8Q9UN66 801 aa13.44□□□□□ -0.26
TUBA1B-201ENST00000332858 CCDC162PA2VCL2 907 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 ADAMTS4O75173 837 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 CAPNS1P04632 268 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 CD1DP15813 335 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 INHBCP55103 352 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 INHBEP58166 350 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 STX5Q13190 355 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 CRHR2Q13324 411 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 POLD3Q15054 466 aaPredicted RBP13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 GPR162Q16538 588 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 RASAL3Q86YV0 1011 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 TEX26Q8N6G2 289 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 PRPF18Q99633 342 aaKnown RBP13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 SLC29A1Q99808 456 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 COQ10BQ9H8M1 238 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 CD300AQ9UGN4 299 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 IKZF3Q9UKT9 509 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 RAB26Q9ULW5 256 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 AP4S1Q9Y587 144 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 A0A0D9SEW6 157 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 MRASO14807 208 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 NRP2O60462 931 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 KPNA6O60684 536 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 CDK14O94921 469 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 PAPSS2O95340 614 aaPredicted RBP13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 MTHFD2P13995 350 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 GRB7Q14451 532 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 PFKFB4Q16877 469 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 PTGR2Q8N8N7 351 aaPredicted RBP13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 PIP4K2CQ8TBX8 421 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 SOCS4Q8WXH5 440 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 DLG3Q92796 817 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 TADA1Q96BN2 335 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 CCDC126Q96EE4 140 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 TSPAN17Q96FV3 270 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 PRICKLE1Q96MT3 831 aaPredicted RBP13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 RPRD1AQ96P16 312 aaPredicted RBP13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 PPP1R2P1Q96PQ5 205 aa13.43□□□□□ -0.26
TUBA1B-201ENST00000332858 IGLV3-10A0A075B6K4 115 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 CHRM3P20309 590 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 SLC7A2P52569 658 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 ECT2LQ008S8 904 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 MSANTD2Q6P1R3 559 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 IFNL1Q8IU54 200 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 GRIN3AQ8TCU5 1115 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 EME1Q96AY2 570 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 C19orf60Q96EN9 201 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.42□□□□□ -0.269e-23■■■□□ 19.1
TUBA1B-201ENST00000332858 CD3EAPO15446 510 aaKnown RBP13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 OAZ2O95190 189 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 SLC2A3P11169 496 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 OR1E1P30953 314 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 CAP1Q01518 475 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 MTX3Q5HYI7 312 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 SLC22A9Q8IVM8 553 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 GRIP2Q9C0E4 1043 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 TUBB1Q9H4B7 451 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 SPAG4Q9NPE6 437 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 SUCOQ9UBS9 1254 aaKnown RBP13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 SARDHQ9UL12 918 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 SNX13Q9Y5W8 968 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 GREB1Q4ZG55 1949 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 VILLO15195 856 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 RAMP2O60895 175 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 CLPTM1O96005 669 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 GPX3P22352 226 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 FDXRP22570 491 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 PSMD8P48556 350 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 RPL26P61254 145 aaKnown RBP13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 HERVK_113P63132 956 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 RHDQ02161 417 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 TAF10Q12962 218 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 SERINC3Q13530 473 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 VPS26BQ4G0F5 336 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 NADK2Q4G0N4 442 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 C10orf120Q5SQS8 335 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 NADSYN1Q6IA69 706 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 HMBOX1Q6NT76 420 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 HERC6Q8IVU3 1022 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 LINC01599Q8WXQ3 324 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 L3HYPDHQ96EM0 354 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 FAR2Q96K12 515 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 UROC1Q96N76 676 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 ERVK-6Q9BXR3 956 aa13.42□□□□□ -0.26
TUBA1B-201ENST00000332858 CCSER2Q9H7U1 834 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms