RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 LMCD1Q9NZU5 365 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 IFT80Q9P2H3 777 aaPredicted RBP14.06□□□□□ -0.16
EPHB3-201ENST00000330394 ST14Q9Y5Y6 855 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 RRN3P2A6NIE6 340 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 TP73O15350 636 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 PRKCHP24723 683 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 LHX1P48742 406 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 CEACAM7Q14002 265 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 KRT33BQ14525 404 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 IQSEC1Q6DN90 963 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 SIAH1Q8IUQ4 282 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 NIPA2Q8N8Q9 360 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 FLCNQ8NFG4 579 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 CERKQ8TCT0 537 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 PEBP4Q96S96 227 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 OXSMQ9NWU1 459 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 UXTQ9UBK9 157 aaPredicted RBP14.06□□□□□ -0.16
EPHB3-201ENST00000330394 TMCC3Q9ULS5 477 aa14.06□□□□□ -0.16
EPHB3-201ENST00000330394 ALDOAP04075 364 aaKnown RBP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 IMPDH2P12268 514 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 AQP1P29972 269 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 ASPAP45381 313 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 HARS2P49590 506 aaKnown RBP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 RAB14P61106 215 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 CPSF6Q16630 551 aaKnown RBP eCLIP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 AP5B1Q2VPB7 878 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 SYTL3Q4VX76 610 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 HECTD2Q5U5R9 776 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 ZNF57Q68EA5 555 aaPredicted RBP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 SLC26A9Q7LBE3 791 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 DQX1Q8TE96 717 aaKnown RBP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 CPA4Q9UI42 421 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 SPATA2Q9UM82 520 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 CDC14AQ9UNH5 594 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 PLIN4Q96Q06 1357 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 F5H5T6 163 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 PIP5K1BO14986 540 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 ZBTB14O43829 449 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 VPS4BO75351 444 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 SIX3O95343 332 aaPredicted RBP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 BLVRAP53004 296 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 RHDQ02161 417 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 TRIQKQ629K1 86 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 TTC23LQ6PF05 361 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 EPGNQ6UW88 154 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 AHSA2Q719I0 299 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 STRADAQ7RTN6 431 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 CENPSQ8N2Z9 138 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 PIWIL1Q96J94 861 aaKnown RBP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 DLX3O60479 287 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 PTPN3P26045 913 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 COPZ1P61923 177 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 ECT2LQ008S8 904 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 ZNF177Q13360 481 aaPredicted RBP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 TOP3AQ13472 1001 aaPredicted RBP14.05□□□□□ -0.16
EPHB3-201ENST00000330394 DNASE1L3Q13609 305 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 CRY2Q49AN0 593 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 DENND5AQ6IQ26 1287 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 CNSTQ6PJW8 725 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 GPRIN3Q6ZVF9 776 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 LZTR1Q8N653 840 aa14.05□□□□□ -0.16
EPHB3-201ENST00000330394 CNPP09543 421 aaKnown RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 L1CAMP32004 1257 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 ARL2P36404 184 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 OXCT1P55809 520 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 MED22Q15528 200 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 PDCD4Q53EL6 469 aaKnown RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 RAB6CQ53S08 254 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 FGD3Q5JSP0 725 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 GNASQ5JWF2 1037 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 STXBP5Q5T5C0 1151 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 TMEM132CQ8N3T6 1108 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 HM13Q8TCT9 377 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 TRIM63Q969Q1 353 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 RAB6CQ9H0N0 254 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 NXF3Q9H4D5 531 aaKnown RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 GLOD4Q9HC38 313 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 SCUBE2Q9NQ36 999 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 RPRD1BQ9NQG5 326 aaKnown RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 H2AFY2Q9P0M6 372 aaPredicted RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 PDE10AQ9Y233 779 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 POLR3HQ9Y535 204 aaPredicted RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 KCPQ6ZWJ8 1503 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 FAM25AB3EWG3 89 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 FAM25CB3EWG5 89 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 FAM25GB3EWG6 89 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 PSMD11O00231 422 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 LGALS2P05162 132 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 TBX4P57082 545 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 MTPNP58546 118 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 ALDH6A1Q02252 535 aaKnown RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 GALNT3Q14435 633 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 NCF4Q15080 339 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 AARS2Q5JTZ9 985 aaKnown RBP14.04□□□□□ -0.16
EPHB3-201ENST00000330394 LUZP2Q86TE4 346 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 FAM35AQ86V20 835 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 UBE2J2Q8N2K1 259 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 TBATAQ96M53 351 aa14.04□□□□□ -0.16
EPHB3-201ENST00000330394 DMRTB1Q96MA1 342 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms