RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 HOXB8P17481 243 aaPredicted RBP14.57□□□□□ -0.08
TPM3-206ENST00000330188 HOXD10P28358 340 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 ATP5C1P36542 298 aaKnown RBP14.57□□□□□ -0.08
TPM3-206ENST00000330188 RGRP47804 291 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 SQLEQ14534 574 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 UNC50Q53HI1 259 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 IL31Q6EBC2 164 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 OR52E8Q6IFG1 317 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 SDCCAG8Q86SQ7 713 aaPredicted RBP14.57□□□□□ -0.08
TPM3-206ENST00000330188 NPAS4Q8IUM7 802 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 RAET1EQ8TD07 263 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 EBF3Q9H4W6 596 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 SUFUQ9UMX1 484 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 PSMD13Q9UNM6 376 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 TRAF6Q9Y4K3 522 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 CCDC189A1A4V9 331 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 STX16-NPEPL1H3BU86 382 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 UBDO15205 165 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 TRPA1O75762 1119 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 SUPT7LO94864 414 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 PRSS56P0CW18 603 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 ZNF37AP17032 561 aaPredicted RBP14.57□□□□□ -0.08
TPM3-206ENST00000330188 CDH4P55283 916 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 XIAPP98170 497 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 MS4A2Q01362 244 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 FLOT2Q14254 428 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 TRIP10Q15642 601 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 TYSND1Q2T9J0 566 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 EML3Q32P44 896 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 CYHR1Q6ZMK1 362 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 CRIPAKQ8N1N5 446 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 BBS5Q8N3I7 341 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 FBXO22Q8NEZ5 403 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 CDKN2AIPNLQ96HQ2 116 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 PRICKLE1Q96MT3 831 aaPredicted RBP14.57□□□□□ -0.08
TPM3-206ENST00000330188 PSKH2Q96QS6 385 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 CDK5RAP1Q96SZ6 601 aaKnown RBP14.57□□□□□ -0.08
TPM3-206ENST00000330188 TMEM175Q9BSA9 504 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 AARSD1Q9BTE6 412 aaKnown RBP14.57□□□□□ -0.08
TPM3-206ENST00000330188 POPDC3Q9HBV1 291 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 MRGBPQ9NV56 204 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 UBA2Q9UBT2 640 aaPredicted RBP14.57□□□□□ -0.08
TPM3-206ENST00000330188 SEPT3Q9UH03 358 aa14.57□□□□□ -0.08
TPM3-206ENST00000330188 SMIM24O75264 130 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 INHAP05111 366 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 UBTFL6P0CB48 400 aaPredicted RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 TSPAN8P19075 237 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 ME2P23368 584 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 MSX2P35548 267 aaPredicted RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 ZNF140P52738 457 aaPredicted RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 STC1P52823 247 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 AQP4P55087 323 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 RPS24P62847 133 aaKnown RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 HERVK_113P63132 956 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 PTK2BQ14289 1009 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 CLEC6AQ6EIG7 209 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 APLFQ8IW19 511 aaPredicted RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 PQLC1Q8N2U9 271 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 RNF148Q8N7C7 305 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 PXYLP1Q8TE99 480 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 TMA16Q96EY4 203 aaKnown RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 CINPQ9BW66 212 aaPredicted RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 ERVK-6Q9BXR3 956 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 RETREG1Q9H6L5 497 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 NLE1Q9NVX2 485 aaPredicted RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 UTP6Q9NYH9 597 aaKnown RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 SPO11Q9Y5K1 396 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 TBKBP1A7MCY6 615 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 KDELR3O43731 214 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 KIF1CO43896 1103 aaKnown RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 LYNP07948 512 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 SLC11A2P49281 568 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 OR4D1Q15615 310 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 OGFRL1Q5TC84 451 aaPredicted RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 RYBPQ8N488 228 aaPredicted RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 EXT2Q93063 718 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 SPON2Q9BUD6 331 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 TRPC7Q9HCX4 862 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 INTS10Q9NVR2 710 aaKnown RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 C6orf203Q9P0P8 240 aaPredicted RBP14.56□□□□□ -0.08
TPM3-206ENST00000330188 PHF24Q9UPV7 400 aa14.56□□□□□ -0.08
TPM3-206ENST00000330188 H3BMM5 538 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 PSMD12O00232 456 aaPredicted RBP14.55□□□□□ -0.08
TPM3-206ENST00000330188 PEX1O43933 1283 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 CRTAMO95727 393 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 CR2P20023 1033 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 SGSHP51688 502 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 OXCT1P55809 520 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 MRPS22P82650 360 aaKnown RBP14.55□□□□□ -0.08
TPM3-206ENST00000330188 BFSP2Q13515 415 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 FASTKQ14296 549 aaKnown RBP14.55□□□□□ -0.08
TPM3-206ENST00000330188 MAPRE2Q15555 327 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 DENND1CQ8IV53 801 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 PTGR2Q8N8N7 351 aaPredicted RBP14.55□□□□□ -0.08
TPM3-206ENST00000330188 SEPT8Q92599 483 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 EXOC2Q96KP1 924 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 MRPL9Q9BYD2 267 aaKnown RBP14.55□□□□□ -0.08
TPM3-206ENST00000330188 MRPL1Q9BYD6 325 aaKnown RBP14.55□□□□□ -0.08
TPM3-206ENST00000330188 NACA2Q9H009 215 aa14.55□□□□□ -0.08
TPM3-206ENST00000330188 PCDHGA7Q9Y5G6 932 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms