RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 TOP3AQ13472 1001 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 ACAP2Q15057 778 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 TRIM60Q495X7 471 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 AMIGO3Q86WK7 504 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 AVL9Q8NBF6 648 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 XPR1Q9UBH6 696 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 YIPF1Q9Y548 306 aa11.43□□□□□ -0.58
COL4A5-201ENST00000328300 COL16A1Q07092 1604 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-201ENST00000328300 A0A1W2PQ45 241 aaPredicted RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 A0A1W2PQY0 241 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ATP6V1B2P21281 511 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 C21orf59P57076 290 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 GPR33Q49SQ1 333 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 LDLRAP1Q5SW96 308 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 HECTD2Q5U5R9 776 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 C10orf53Q8N6V4 93 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 CCDC185Q8N715 623 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 OTUB2Q96DC9 234 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 PIH1D1Q9NWS0 290 aaKnown RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 VPS4AQ9UN37 437 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 COLEC10Q9Y6Z7 277 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 BAZ2BQ9UIF8 2168 aaKnown RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ASMTP46597 345 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 PKNOX1P55347 436 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 PTCD3Q96EY7 689 aaKnown RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 FAM83DQ9H4H8 585 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ZFP14Q9HCL3 533 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 GPSM3Q9Y4H4 160 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 UBR2Q8IWV8 1755 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 WDR47O94967 919 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 FSBPO95073 299 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 BST1Q10588 318 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 RFTN2Q52LD8 501 aaPredicted RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 TRPC4APQ8TEL6 797 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 NUSAP1Q9BXS6 441 aaKnown RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 DNAJC11Q9NVH1 559 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 INVSQ9Y283 1065 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF623O75123 536 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 C8GP07360 202 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ALDH6A1Q02252 535 aaKnown RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 NCF4Q15080 339 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 CHSY3Q70JA7 882 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 IQCKQ8N0W5 287 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ITFG1Q8TB96 612 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 SPACA7Q96KW9 195 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 LRRC4CQ9HCJ2 640 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 DNAJC28Q9NX36 388 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ANAPC2Q9UJX6 822 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 GBE1Q04446 702 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 KHDRBS2Q5VWX1 349 aaKnown RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF783Q6ZMS7 281 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF567Q8N184 647 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 CMASQ8NFW8 434 aaPredicted RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ITCHQ96J02 903 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 AIF1LQ9BQI0 150 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 GEMIN8Q9NWZ8 242 aaKnown RBP11.42□□□□□ -0.58
COL4A5-201ENST00000328300 ZNHIT2Q9UHR6 403 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 PLLPQ9Y342 182 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 RGPD2P0DJD1 1756 aa11.42□□□□□ -0.58
COL4A5-201ENST00000328300 MEI4A8MW99 385 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 TRIM38O00635 465 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 DNAJA2O60884 412 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 TCEA3O75764 348 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SASH3O75995 380 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SHBGP04278 402 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 MAXP61244 160 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 RPL26P61254 145 aaKnown RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 ERVK-21P61565 698 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 PDGFRLQ15198 375 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SNX30Q5VWJ9 437 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 GPR141Q7Z602 305 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SERINC5Q86VE9 423 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 EXOC3L1Q86VI1 746 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 POLMQ9NP87 494 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 CREBZFQ9NS37 354 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF232Q9UNY5 417 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 PRDX6P30041 224 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 NME5P56597 212 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 XKR6Q5GH73 641 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 RGL4Q8IZJ4 473 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 KLHL5Q96PQ7 755 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SPAG4Q9NPE6 437 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 ADAM30Q9UKF2 790 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 IGKV6D-21A0A0A0MT36 114 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SLC22A2O15244 555 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SOX6P35712 828 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 JAG1P78504 1218 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 AP5B1Q2VPB7 878 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 GET4Q7L5D6 327 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 C17orf64Q86WR6 236 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 ATG16L2Q8NAA4 619 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 FIG4Q92562 907 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 HOPXQ9BPY8 73 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-201ENST00000328300 ROGDIQ9GZN7 287 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 AASDHPPTQ9NRN7 309 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SNX8Q9Y5X2 465 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 SERPINI2O75830 405 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 COX4I1P13073 169 aa11.41□□□□□ -0.58
COL4A5-201ENST00000328300 GSTA3Q16772 222 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms