RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ATAD3BQ5T9A4 648 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 CLEC6AQ6EIG7 209 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 ZNF280DQ6N043 979 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 SLC22A16Q86VW1 577 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 SCML4Q8N228 414 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC60-201ENST00000327554 ZMAT2Q96NC0 199 aaKnown RBP12.8□□□□□ -0.36
CCDC60-201ENST00000327554 POLE4Q9NR33 117 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 FBXO8Q9NRD0 319 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 IGSF5Q9NSI5 407 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 NRBP2Q9NSY0 501 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 ANAPC2Q9UJX6 822 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 NME7Q9Y5B8 376 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 SCN1AP35498 2009 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 AURKAO14965 403 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 NCK1P16333 377 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 CTBP1Q13363 440 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 TECRLQ5HYJ1 363 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 ACOT1Q86TX2 421 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 LRRC71Q8N4P6 559 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 LRRC58Q96CX6 371 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 HDAC11Q96DB2 347 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 TSPAN18Q96SJ8 248 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 KIFC1Q9BW19 673 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 DGCR6LQ9BY27 220 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 ADNPQ9H2P0 1102 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 FZD8Q9H461 694 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 GDAP2Q9NXN4 497 aa12.8□□□□□ -0.36
CCDC60-201ENST00000327554 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.8□□□□□ -0.36
CCDC60-201ENST00000327554 NUP205Q92621 2012 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 ERI2A8K979 691 aaKnown RBP12.79□□□□□ -0.36
CCDC60-201ENST00000327554 C9JVG2 144 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 IPO13O94829 963 aaKnown RBP12.79□□□□□ -0.36
CCDC60-201ENST00000327554 BMPR1AP36894 532 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 POLD2P49005 469 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 GSK3BP49841 420 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 GP2P55259 537 aaKnown RBP12.79□□□□□ -0.36
CCDC60-201ENST00000327554 PIGFQ07326 219 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 GEN1Q17RS7 908 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 OTUD3Q5T2D3 398 aaPredicted RBP12.79□□□□□ -0.36
CCDC60-201ENST00000327554 UGT3A1Q6NUS8 523 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 STRADAQ7RTN6 431 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 THAP5Q7Z6K1 395 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 PTRH1Q86Y79 214 aaKnown RBP12.79□□□□□ -0.36
CCDC60-201ENST00000327554 CNTN4Q8IWV2 1026 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 C7orf31Q8N865 590 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 NAT16Q8N8M0 369 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 PIK3C3Q8NEB9 887 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 HDAC2Q92769 488 aaKnown RBP12.79□□□□□ -0.36
CCDC60-201ENST00000327554 TMEM125Q96AQ2 219 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 TXNDC15Q96J42 360 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 GSTO2Q9H4Y5 243 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 RPAP3Q9H6T3 665 aaPredicted RBP12.79□□□□□ -0.36
CCDC60-201ENST00000327554 NTN4Q9HB63 628 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 PARVBQ9HBI1 364 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 SPON1Q9HCB6 807 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 UPK1AO00322 258 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 RGS13O14921 159 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 STAG3L1P0CL83 205 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 PLK1P53350 603 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 ARSFP54793 590 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 DMPKQ09013 629 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 GALNT1Q10472 559 aaPredicted RBP12.79□□□□□ -0.36
CCDC60-201ENST00000327554 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 ZCCHC7Q8N3Z6 543 aaKnown RBP12.79□□□□□ -0.36
CCDC60-201ENST00000327554 OSCP1Q8WVF1 389 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 ELMO2Q96JJ3 720 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 LPIN3Q9BQK8 851 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 HPS4Q9NQG7 708 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 BAG5Q9UL15 447 aa12.79□□□□□ -0.36
CCDC60-201ENST00000327554 NRCAMQ92823 1304 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 A0A087X1B8 175 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 INO80B-WBP1J3KQ70 363 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 DCLK1O15075 740 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ANGPT2O15123 496 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 NUAK1O60285 661 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 INMTO95050 263 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 GJB1P08034 283 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 UMPSP11172 480 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 TCF3P15923 654 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 NFKB1P19838 968 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 BDNFP23560 247 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 APLP1P51693 650 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 NKX2-5P52952 324 aaPredicted RBP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ADAM17P78536 824 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 CDC20Q12834 499 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 MXD4Q14582 209 aaPredicted RBP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 ACAP2Q15057 778 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 UGP2Q16851 508 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 LRIT3Q3SXY7 679 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 SPATS1Q496A3 300 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 OTUD1Q5VV17 481 aaPredicted RBP12.78□□□□□ -0.36
CCDC60-201ENST00000327554 BTBD8Q5XKL5 378 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 CATSPER4Q7RTX7 472 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 IFNEQ86WN2 208 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 PDZD8Q8NEN9 1154 aa12.78□□□□□ -0.36
CCDC60-201ENST00000327554 REPS2Q8NFH8 660 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms