RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TOP6BLQ8N6T0 577 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 HAS1Q92839 578 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 ELL3Q9HB65 397 aaPredicted RBP21.05■□□□□ 0.96
RNF40-201ENST00000324685 TRIM39Q9HCM9 518 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 HMX1Q9NP08 348 aaPredicted RBP21.05■□□□□ 0.96
RNF40-201ENST00000324685 ZNF510Q9Y2H8 683 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 OR5F1O95221 314 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 BMT2Q1RMZ1 405 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 SLC5A9Q2M3M2 681 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 FAM98AQ8NCA5 519 aaKnown RBP21.05■□□□□ 0.96
RNF40-201ENST00000324685 C1QTNF1Q9BXJ1 281 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 C3orf14Q9HBI5 128 aa21.05■□□□□ 0.96
RNF40-201ENST00000324685 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.04■□□□□ 0.96
RNF40-201ENST00000324685 FERD3LQ96RJ6 166 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 DIP2BQ9P265 1576 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 NDUFS2O75306 463 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 UGT2B17O75795 530 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 CAPSQ13938 189 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 SMCO1Q147U7 214 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 FAM46CQ5VWP2 391 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 ERICH5Q6P6B1 374 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 CATSPERGQ6ZRH7 1159 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 AKAP14Q86UN6 197 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 GLIS3Q8NEA6 775 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 OR2T12Q8NG77 320 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 RHOJQ9H4E5 214 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 RPTORQ8N122 1335 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 LCA5LO95447 670 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 SLC35G4P0C7Q5 338 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 OGNP20774 298 aaKnown RBP21.04■□□□□ 0.96
RNF40-201ENST00000324685 ACADLP28330 430 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 CRHR1P34998 444 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 BEX3Q00994 111 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 RIPK1Q13546 671 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 PQLC1Q8N2U9 271 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 TM6SF2Q9BZW4 377 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 CAB39LQ9H9S4 337 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 SEMA3GQ9NS98 782 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 DNAJC28Q9NX36 388 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 FBXL21Q9UKT6 434 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 ZNF214Q9UL59 606 aaPredicted RBP21.04■□□□□ 0.96
RNF40-201ENST00000324685 PSMD13Q9UNM6 376 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 GIT1Q9Y2X7 761 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 PLOD3O60568 738 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 HNRNPH3P31942 346 aaKnown RBP21.04■□□□□ 0.96
RNF40-201ENST00000324685 CASP7P55210 303 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 RTP1P59025 263 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 NOMO2Q5JPE7 1267 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 HDAC10Q969S8 669 aa21.04■□□□□ 0.96
RNF40-201ENST00000324685 A0A0J9YYE9 177 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 NRP2O60462 931 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 NADKO95544 446 aaPredicted RBP21.03■□□□□ 0.96
RNF40-201ENST00000324685 ASGR1P07306 291 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 CDH5P33151 784 aaPredicted RBP21.03■□□□□ 0.96
RNF40-201ENST00000324685 TAS2R40P59535 323 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 PEX6Q13608 980 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 CPSF6Q16630 551 aaKnown RBP eCLIP21.03■□□□□ 0.96
RNF40-201ENST00000324685 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.03■□□□□ 0.96
RNF40-201ENST00000324685 SPATA6LQ8N4H0 392 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 DGCR14Q96DF8 476 aaKnown RBP21.03■□□□□ 0.96
RNF40-201ENST00000324685 DUSP16Q9BY84 665 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 MTFR1LQ9H019 292 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 MCUBQ9NWR8 336 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 TMA7Q9Y2S6 64 aaKnown RBP21.03■□□□□ 0.96
RNF40-201ENST00000324685 MCIDASD6RGH6 385 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 COL6A2P12110 1019 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 ARHGDIBP52566 201 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 GRM3Q14832 879 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 COPS8Q99627 209 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 CCDC28BQ9BUN5 200 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 FTHL17Q9BXU8 183 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 ADGRE2Q9UHX3 823 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 SLC27A6Q9Y2P4 619 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 RGS20O76081 388 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 TNFSF9P41273 254 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 FAM131AQ6UXB0 335 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 FAM92BQ6ZTR7 304 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 LRRC52Q8N7C0 313 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 ZNF354BQ96LW1 612 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 DERAQ9Y315 318 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 ERAL1O75616 437 aaKnown RBP21.03■□□□□ 0.96
RNF40-201ENST00000324685 HTR1BP28222 390 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 DACT2Q5SW24 774 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 PIK3C3Q8NEB9 887 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 CLP1Q92989 425 aaKnown RBP21.03■□□□□ 0.96
RNF40-201ENST00000324685 NPAS2Q99743 824 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 S100A14Q9HCY8 104 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 AASDHPPTQ9NRN7 309 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 TRPS1Q9UHF7 1281 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 RWDD3Q9Y3V2 267 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 MEGF6O75095 1541 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 DHX15O43143 795 aaKnown RBP21.03■□□□□ 0.96
RNF40-201ENST00000324685 LRATO95237 230 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 FGBP02675 491 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 MYBL2P10244 700 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 GMFBP60983 142 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 TIFAQ96CG3 184 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 RHOBTB2Q9BYZ6 727 aa21.03■□□□□ 0.96
RNF40-201ENST00000324685 EPHB6O15197 1021 aa21.02■□□□□ 0.96
RNF40-201ENST00000324685 PAPSS1O43252 624 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms