RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 OR13C4Q8NGS5 318 aa17.07■□□□□ 0.32
PPP3CA-201ENST00000323055 HEXDCQ8WVB3 486 aa17.07■□□□□ 0.32
PPP3CA-201ENST00000323055 CERS4Q9HA82 394 aa17.07■□□□□ 0.32
PPP3CA-201ENST00000323055 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 IFRD1O00458 451 aaPredicted RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 GPC1P35052 558 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 MAPKAPK2P49137 400 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 ATP6V0D1P61421 351 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 ILF2Q12905 390 aaKnown RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 MARCH8Q5T0T0 291 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 GPRIN3Q6ZVF9 776 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 DNAJB7Q7Z6W7 309 aaPredicted RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 OR10T2Q8NGX3 314 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 PTCD2Q8WV60 388 aaKnown RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 RNF145Q96MT1 663 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 HBEGFQ99075 208 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 EBF4Q9BQW3 602 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 FETUBQ9UGM5 382 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 GNEQ9Y223 722 aaKnown RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 NPEPPSL1A6NEC2 478 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 CATP04040 527 aaKnown RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 FAM163BP0C2L3 166 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 IVDP26440 423 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 ALDH9A1P49189 494 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 AFF1P51825 1210 aaKnown RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 ADAMTSL2Q86TH1 951 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 CAND1Q86VP6 1230 aaKnown RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 TRIM48Q8IWZ4 208 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 TP53INP2Q8IXH6 220 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 STYXQ8WUJ0 223 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 ING5Q8WYH8 240 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 NPAS2Q99743 824 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 ZCCHC2Q9C0B9 1178 aaKnown RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 PGAP2Q9UHJ9 254 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 ARL5AQ9Y689 179 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 PAPPAQ13219 1627 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 MGEA5O60502 916 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 SIN3BO75182 1162 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 C8AP07357 584 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 NEK3P51956 506 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 TRAF2Q12933 501 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 LACTB2Q53H82 288 aaPredicted RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 TNIP2Q8NFZ5 429 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 LRMDAQ9H2I8 198 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 SLC2A6Q9UGQ3 507 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 FKBPLQ9UIM3 349 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 PSAT1Q9Y617 370 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 C9JVG2 144 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 ULK1O75385 1050 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 CDH2P19022 906 aaPredicted RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 ABRQ12979 859 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 DMC1Q14565 340 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 PAFAH1B3Q15102 231 aaKnown RBP17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 TXNDC8Q6A555 127 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 RBFAQ8N0V3 343 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 NMUR1Q9HB89 426 aa17.06■□□□□ 0.32
PPP3CA-201ENST00000323055 DDX5P17844 614 aaKnown RBP17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 CES1P23141 567 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 FASP25445 335 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 ACSM2AQ08AH3 577 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 VAC14Q08AM6 782 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 ACSM2BQ68CK6 577 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 C14orf80Q86SX3 495 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 SMOC2Q9H3U7 446 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 CAPN10Q9HC96 672 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 LRCH1Q9Y2L9 728 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 MYO18AQ92614 2054 aaKnown RBP17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 COL22A1Q8NFW1 1626 aaPredicted RBP17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 COL4A1P02462 1669 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 RGS14O43566 566 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 COL6A2P12110 1019 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 SGCGQ13326 291 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 KIAA0408Q6ZU52 694 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 GFM2Q969S9 779 aaKnown RBP17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 LIMD1Q9UGP4 676 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 MYH9P35579 1960 aaKnown RBP17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 MLYCDO95822 493 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 GRIA3P42263 894 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 HCAR3P49019 387 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 CREMQ03060 361 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 NRF1Q16656 503 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 MPPE1Q53F39 396 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 MYO7AQ13402 2215 aa17.05■□□□□ 0.32
PPP3CA-201ENST00000323055 KANSL1LA0AUZ9 987 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 F8W810 466 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 TGDSO95455 350 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 CHRNGP07510 517 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 VCLP18206 1134 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 ATP6V1E1P36543 226 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 RPL38P63173 70 aaKnown RBP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 LRRC73Q5JTD7 316 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 FAM9CQ8IZT9 166 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 RP9Q8TA86 221 aaKnown RBP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 ZNF184Q99676 751 aaPredicted RBP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 SH3GL1Q99961 368 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 STN1Q9H668 368 aaKnown RBP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 FAM159BA6NKW6 160 aa17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 SLC25A14O95258 325 aaPredicted RBP17.04■□□□□ 0.32
PPP3CA-201ENST00000323055 FGBP02675 491 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms