RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 DPH1Q9BZG8 443 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 TSPY26PQ9H489 355 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 CARS2Q9HA77 564 aaKnown RBP12.7□□□□□ -0.38
CKS2-201ENST00000314355 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 SATB2Q9UPW6 733 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 RAI2Q9Y5P3 530 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 U3KQA8 63 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 ADAMTS20P59510 1910 aa12.7□□□□□ -0.38
CKS2-201ENST00000314355 CCDC187A0A096LP49 1063 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 TMEM202A6NGA9 273 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 DXOO77932 396 aaKnown RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 RPLP0P05388 317 aaKnown RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 TMEM253P0C7T8 217 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 CCNB1P14635 433 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 PNLIPP16233 465 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 ZFXP17010 805 aaPredicted RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 ZNF30P17039 623 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 ITPKBP27987 946 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 ARHGAP25P42331 645 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 PPM1FP49593 454 aaPredicted RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 DPYSL3Q14195 570 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 MESDQ14696 234 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 CNGA3Q16281 694 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 TXNRD3NBQ6F5E7 133 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 CCDC70Q6NSX1 233 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 BZW1Q7L1Q6 419 aaKnown RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 GPR155Q7Z3F1 870 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 RHOT2Q8IXI1 618 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.69□□□□□ -0.38
CKS2-201ENST00000314355 TEX26Q8N6G2 289 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 FAM71BQ8TC56 605 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 CCHCR1Q8TD31 782 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 OR1E3Q8WZA6 343 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 CCDC74AQ96AQ1 378 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 ATXN7L3BQ96GX2 97 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 NAF1Q96HR8 494 aaKnown RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 COQ10AQ96MF6 247 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 UBL7Q96S82 380 aaPredicted RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 LRRN3Q9H3W5 708 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 SUDS3Q9H7L9 328 aaPredicted RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 CAAP1Q9H8G2 361 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 MRPL40Q9NQ50 206 aaKnown RBP12.69□□□□□ -0.38
CKS2-201ENST00000314355 LRIT1Q9P2V4 623 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 PCDHGA8Q9Y5G5 932 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 ENTPD2Q9Y5L3 495 aa12.69□□□□□ -0.38
CKS2-201ENST00000314355 PRSS38A1L453 326 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 RHPN2P1A8MT19 583 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 PEX11BO96011 259 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 CTPS1P17812 591 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 KDELR1P24390 212 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 IL4RP24394 825 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 TEAD1P28347 426 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 MAN1A1P33908 653 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 ETV3P41162 512 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 TNNT3P45378 269 aaPredicted RBP12.68□□□□□ -0.38
CKS2-201ENST00000314355 INHBCP55103 352 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 RPL26P61254 145 aaKnown RBP12.68□□□□□ -0.38
CKS2-201ENST00000314355 GALNT2Q10471 571 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 TRAF2Q12933 501 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 ATP13A4Q4VNC1 1196 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 C14orf28Q4W4Y0 310 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 NCBP2-AS2Q69YL0 99 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 OGFOD3Q6PK18 319 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 HEATR4Q86WZ0 1026 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 CNGA4Q8IV77 575 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 RAVER1Q8IY67 606 aaKnown RBP12.68□□□□□ -0.38
CKS2-201ENST00000314355 CCDC13Q8IYE1 715 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 PGBD5Q8N414 524 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 FBXO39Q8N4B4 442 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 Q8N9G6 341 aaPredicted RBP12.68□□□□□ -0.38
CKS2-201ENST00000314355 SLC35G2Q8TBE7 412 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 AP2M1Q96CW1 435 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 DTD2Q96FN9 168 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 PDXPQ96GD0 296 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 SLC46A1Q96NT5 459 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 FCRL3Q96P31 734 aaPredicted RBP12.68□□□□□ -0.38
CKS2-201ENST00000314355 TSGA13Q96PP4 275 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 TEX101Q9BY14 249 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 ADGRE3Q9BY15 652 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 TMEM168Q9H0V1 697 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 EPB41L5Q9HCM4 733 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 TRNAU1APQ9NX07 287 aaKnown RBP12.68□□□□□ -0.38
CKS2-201ENST00000314355 PNMA8BQ9ULN7 279 aaPredicted RBP12.68□□□□□ -0.38
CKS2-201ENST00000314355 RPL26L1Q9UNX3 145 aaKnown RBP12.68□□□□□ -0.38
CKS2-201ENST00000314355 PPIL1Q9Y3C6 166 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 APC2O95996 2303 aa12.68□□□□□ -0.38
CKS2-201ENST00000314355 FRYQ5TBA9 3013 aa12.67□□□□□ -0.38
CKS2-201ENST00000314355 AKAP13Q12802 2813 aa12.67□□□□□ -0.38
CKS2-201ENST00000314355 MYLKQ15746 1914 aa12.67□□□□□ -0.38
CKS2-201ENST00000314355 TEX51A0A1B0GUA7 166 aa12.67□□□□□ -0.38
CKS2-201ENST00000314355 LRRD1A4D1F6 860 aa12.67□□□□□ -0.38
CKS2-201ENST00000314355 B4DGG1 531 aa12.67□□□□□ -0.38
CKS2-201ENST00000314355 KLK10O43240 276 aa12.67□□□□□ -0.38
CKS2-201ENST00000314355 NUDT21O43809 227 aaKnown RBP12.67□□□□□ -0.38
CKS2-201ENST00000314355 TNFSF15O95150 251 aa12.67□□□□□ -0.38
CKS2-201ENST00000314355 ASMTLO95671 621 aa12.67□□□□□ -0.38
CKS2-201ENST00000314355 CELA2BP08218 269 aaPredicted RBP12.67□□□□□ -0.38
CKS2-201ENST00000314355 CD48P09326 243 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms